Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AL513328.1-201ENST00000446460 224 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 RNU4-57P-201ENST00000515980 135 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 HSPE1P18-201ENST00000517602 280 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AC079598.5-201ENST00000547460 117 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AC099778.2-201ENST00000610904 211 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 SNORA20-201ENST00000384662 132 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 AL606845.1-201ENST00000404881 255 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 SNORA3.2-201ENST00000408221 125 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 RNU4-43P-201ENST00000410628 137 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 AC022018.1-201ENST00000430685 241 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 MIR6844-201ENST00000637122 62 ntBASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL13A1Q5TAT6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 AC000403.1-201ENST00000613696 3585 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 RNU6-407P-201ENST00000365280 104 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 AL353705.1-201ENST00000433468 480 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 RPS27P1-201ENST00000450552 247 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 HSPE1P13-201ENST00000451143 297 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
COL13A1Q5TAT6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 RNU6-1325P-201ENST00000364905 105 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 SNORA9.2-201ENST00000365361 133 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 Y_RNA.563-201ENST00000384707 108 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 MIR1185-2-201ENST00000408687 86 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 HSPE1P21-201ENST00000438283 308 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 AC025554.1-201ENST00000505641 188 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 RN7SKP179-201ENST00000516126 217 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 Y_RNA.686-201ENST00000516548 134 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 RNU6-1234P-201ENST00000516877 103 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 AC011603.4-201ENST00000611325 277 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 AL136164.4-201ENST00000625013 2135 ntBASIC3.77□□□□□ -1.81
COL13A1Q5TAT6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 ZNF658B-202ENST00000615961 3375 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 RNU6-1305P-201ENST00000364353 104 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 Y_RNA.393-201ENST00000383936 102 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 RNU6-44P-201ENST00000384045 107 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 MIR873-201ENST00000401120 77 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 RPL36AP48-201ENST00000485521 314 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 UBL5P2-201ENST00000583788 219 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 MIR4781-201ENST00000585250 76 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 MIR548AY-201ENST00000617669 107 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 AL773545.4-201ENST00000637262 310 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 AL513478.4-201ENST00000641636 310 ntBASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL13A1Q5TAT6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 snoU2_19.1-201ENST00000362361 80 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 RNU6-271P-201ENST00000363858 105 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 SNORA71.1-201ENST00000364523 117 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 RNU6-1056P-201ENST00000383996 107 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 Y_RNA.521-201ENST00000384560 114 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 MIR196B-201ENST00000384852 84 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 MIR29B2-201ENST00000385055 81 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 MIR513A2-201ENST00000385249 127 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 MT-TT-201ENST00000387460 66 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 RPL23AP7-203ENST00000449021 469 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AC112771.1-201ENST00000463581 102 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AC092991.1-201ENST00000477176 376 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 RNU7-115P-201ENST00000516433 55 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms