Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL356095.1-201ENST00000417217 199 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VARS2Q5ST30 SNORD19.2-201ENST00000516978 73 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 AC006441.5-201ENST00000612680 209 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 AL512310.12-203ENST00000640543 90 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 FAM35BP-202ENST00000497389 3337 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 Y_RNA.57-201ENST00000362806 113 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RNU1-20P-201ENST00000363314 162 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 SNORD115-37-201ENST00000363768 82 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RNU6-478P-201ENST00000363904 110 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RNU1-57P-201ENST00000384491 166 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RNU6-1235P-201ENST00000384559 107 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 MIR1911-201ENST00000410783 80 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 Z92545.1-201ENST00000411782 234 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 AC090844.1-201ENST00000422019 156 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 RNU6-498P-201ENST00000459468 107 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 AC026726.1-201ENST00000512859 601 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 MIR3134-201ENST00000579433 74 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 MIR6867-201ENST00000610636 67 ntBASIC4.53□□□□□ -1.68
VARS2Q5ST30 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VARS2Q5ST30 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.53□□□□□ -1.68
VARS2Q5ST30 AL356489.2-201ENST00000566968 3528 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VARS2Q5ST30 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 MFSD8-236ENST00000641509 4050 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 SNORA63.1-201ENST00000362493 131 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 MIR483-201ENST00000385070 76 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 RNU6-141P-201ENST00000410499 105 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 RN7SKP167-201ENST00000411047 285 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 AL441985.1-201ENST00000457727 251 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 AL133162.1-201ENST00000463228 453 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 AC108729.3-201ENST00000513484 108 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 RNU6-928P-201ENST00000516876 104 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 SNORA18.7-201ENST00000516910 131 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 AC006064.5-201ENST00000541782 248 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 HSPE1P5-201ENST00000561489 272 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 RNU6-86P-201ENST00000606534 107 ntBASIC4.52□□□□□ -1.69
VARS2Q5ST30 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VARS2Q5ST30 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
VARS2Q5ST30 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VARS2Q5ST30 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VARS2Q5ST30 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VARS2Q5ST30 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VARS2Q5ST30 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VARS2Q5ST30 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VARS2Q5ST30 RNA5SP130-201ENST00000364431 114 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 RNU6-411P-201ENST00000384451 107 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 Y_RNA.547-201ENST00000384654 119 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 MIR449B-201ENST00000384995 97 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 RPL31P63-201ENST00000422565 375 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 AL445646.1-201ENST00000431784 216 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 AC006445.1-201ENST00000491925 405 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.51□□□□□ -1.69
VARS2Q5ST30 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
VARS2Q5ST30 RNU1-30P-201ENST00000606575 163 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 MIR6875-201ENST00000617506 72 ntBASIC4.51□□□□□ -1.69
VARS2Q5ST30 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VARS2Q5ST30 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VARS2Q5ST30 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VARS2Q5ST30 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 SCN1A-220ENST00000641603 12506 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 SNORD66.1-201ENST00000391230 76 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 MIR1183-201ENST00000408856 89 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 RPS12P2-201ENST00000439728 269 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 AC013412.1-201ENST00000610687 192 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
VARS2Q5ST30 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VARS2Q5ST30 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 266.5 ms