Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.1
SNAI3Q3KNW1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.9□□□□□ -2.1
SNAI3Q3KNW1 ZNF204P-201ENST00000416749 2397 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 RNU6-873P-201ENST00000363833 107 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 RNU6-280P-201ENST00000364145 104 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 RNU6-702P-201ENST00000364982 107 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AL079342.1-201ENST00000401460 267 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 RNU6-121P-201ENST00000410525 99 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AL445305.1-201ENST00000432577 575 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 LINC01399-202ENST00000458450 244 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC025465.3-201ENST00000510570 311 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 SNORA40.15-201ENST00000516884 107 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC093023.1-201ENST00000547375 507 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC007229.1-201ENST00000590455 412 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC011476.5-201ENST00000615594 130 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 AC130454.1-201ENST00000622948 401 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 SCARNA15.3-201ENST00000626315 122 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 SCARNA4.1-201ENST00000628597 123 ntBASIC1.9□□□□□ -2.11
SNAI3Q3KNW1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 RNU6-245P-201ENST00000384020 107 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 RNU6-472P-201ENST00000384299 107 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 RNU6-505P-201ENST00000384427 107 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 MIR549A-201ENST00000385268 96 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 SNORD115-46-201ENST00000390982 71 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 MRPL35P1-201ENST00000404272 572 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 SNORD12B-201ENST00000410433 91 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 AC145146.1-201ENST00000496370 254 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 SNORA25.14-201ENST00000516481 132 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 AC136932.1-201ENST00000574771 208 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 MIR3671-201ENST00000580455 88 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 AC010999.1-201ENST00000611856 324 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 ZNF658B-202ENST00000615961 3375 ntBASIC1.89□□□□□ -2.11
SNAI3Q3KNW1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 U3.9-201ENST00000363823 204 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RNU6-926P-201ENST00000384075 107 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RNU6-1274P-201ENST00000384557 107 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 MT-TW-201ENST00000387382 68 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AC010095.1-201ENST00000443543 144 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RPL26P26-201ENST00000480251 434 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RNA5SP200-201ENST00000516360 103 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 RNU6-667P-201ENST00000517186 102 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AP003733.2-201ENST00000529409 171 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AC006006.1-201ENST00000603082 144 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 MIR6852-201ENST00000621699 66 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 IGHVIII-44-202ENST00000636235 289 ntBASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SNAI3Q3KNW1 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 LINC02555-201ENST00000563933 1951 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RNU4-82P-201ENST00000362443 140 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RNU1-62P-201ENST00000362599 164 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RNU6-713P-201ENST00000384761 107 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 MIR634-201ENST00000385208 97 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RPL21P38-201ENST00000418090 167 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 AC007395.1-201ENST00000451333 677 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 PCNPP5-201ENST00000452246 481 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 AC098869.1-201ENST00000481627 292 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RNU6-408P-201ENST00000515910 100 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms