Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC006065.5-201ENST00000623427 349 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 AL356292.1-201ENST00000283110 373 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 Y_RNA.437-201ENST00000384113 113 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 RNU6-675P-201ENST00000384236 104 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 MIR759-201ENST00000390224 91 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 AL353689.1-201ENST00000438895 199 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 RNU6-504P-201ENST00000516568 104 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 DEFB131E-201ENST00000532329 154 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 MIR4662B-201ENST00000579498 81 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 AC002064.3-201ENST00000623448 346 ntBASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.57□□□□□ -1.84
RSPO4Q2I0M5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 AC011266.1-201ENST00000624119 3569 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 SNORA27.1-201ENST00000362604 124 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNY3P2-201ENST00000362918 102 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNU6-884P-201ENST00000363889 107 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNU4-36P-201ENST00000364294 144 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1138P-201ENST00000365359 106 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 Y_RNA.344-201ENST00000365381 112 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 SNORA1-201ENST00000384107 130 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 Y_RNA.486-201ENST00000384398 107 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 EIF4EP4-201ENST00000424916 578 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 SNORD11-201ENST00000459124 84 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 AC010285.1-201ENST00000470580 392 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 SNORA70.18-201ENST00000516696 98 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 RNU7-149P-201ENST00000516739 59 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 MIR2681-201ENST00000581814 105 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 MIR5588-201ENST00000581890 63 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 MIR4276-201ENST00000584832 70 ntBASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.56□□□□□ -1.84
RSPO4Q2I0M5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNU6-271P-201ENST00000363858 105 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1292P-201ENST00000383856 107 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 SNORA48.8-201ENST00000391324 134 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 MIR1261-201ENST00000408659 82 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 MIR1185-2-201ENST00000408687 86 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 HMGN2P20-201ENST00000437531 273 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AL645939.1-201ENST00000453429 797 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNA5SP57-201ENST00000459463 123 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNU7-171P-201ENST00000459581 62 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNY4P20-201ENST00000516678 93 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1149P-201ENST00000516810 97 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AL929325.1-201ENST00000603096 117 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AL033523.1-201ENST00000605153 153 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO4Q2I0M5 AC068254.2-201ENST00000623938 3577 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 MT-TI-201ENST00000387365 69 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 AC018634.1-201ENST00000437554 401 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 RPS27AP10-201ENST00000496103 208 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 AC093663.1-201ENST00000497190 394 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 RNU7-61P-201ENST00000515897 61 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 RNU6-240P-201ENST00000516098 97 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 RNU6-63P-201ENST00000516690 95 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 MIR5004-201ENST00000579078 107 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO4Q2I0M5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms