Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 SNORD45B-201ENST00000364617 72 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 SNORA14A-201ENST00000364773 135 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 RNU6-234P-201ENST00000365229 104 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 Y_RNA.377-201ENST00000365644 108 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 RNU6-1279P-201ENST00000383917 103 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 Y_RNA.611-201ENST00000410682 108 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 SNRPGP5-201ENST00000456003 220 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 BX510359.1-201ENST00000456973 237 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 AL049873.1-201ENST00000480540 376 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 RPS29P21-201ENST00000496272 170 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 AC104619.4-201ENST00000510773 249 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 Y_RNA.659-201ENST00000515994 113 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXC1Q12948 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXC1Q12948 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXC1Q12948 AC091905.2-201ENST00000623143 306 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXC1Q12948 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
FOXC1Q12948 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXC1Q12948 RNU4-67P-201ENST00000364569 141 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 Y_RNA.316-201ENST00000365118 111 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 Y_RNA.440-201ENST00000384120 114 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 DBIP2-201ENST00000419076 262 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 RPS12P18-201ENST00000442381 270 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 AL591623.2-201ENST00000449978 222 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 AL133162.1-201ENST00000463228 453 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXC1Q12948 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXC1Q12948 AL359075.3-201ENST00000613288 217 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 MIR3651-201ENST00000630427 90 ntBASIC3.92□□□□□ -1.78
FOXC1Q12948 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXC1Q12948 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
FOXC1Q12948 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXC1Q12948 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXC1Q12948 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXC1Q12948 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXC1Q12948 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXC1Q12948 AL592182.3-201ENST00000642132 3304 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 Y_RNA.500-201ENST00000384466 111 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 RNY1P4-201ENST00000384595 115 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 Y_RNA.565-201ENST00000384719 101 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR607-201ENST00000385241 96 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 SNORA48.2-201ENST00000390926 124 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR1294-201ENST00000408503 142 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 AL035423.1-201ENST00000420331 213 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 CKS1BP6-201ENST00000424932 240 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 AP001486.1-201ENST00000463339 476 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 RPS26P28-201ENST00000470806 348 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR3609-201ENST00000582661 80 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR3922-201ENST00000585192 84 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 AC090115.4-201ENST00000609970 188 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 AC013412.1-201ENST00000610687 192 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR6852-201ENST00000621699 66 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 AC007546.2-201ENST00000623996 360 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 MIR203B-201ENST00000636080 86 ntBASIC3.91□□□□□ -1.78
FOXC1Q12948 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXC1Q12948 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXC1Q12948 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXC1Q12948 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.9□□□□□ -1.78
FOXC1Q12948 Y_RNA.37-201ENST00000362606 108 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 RNU6-509P-201ENST00000363519 107 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 Y_RNA.467-201ENST00000384297 102 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 MIR548O-201ENST00000408583 114 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 Y_RNA.621-201ENST00000411065 96 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 SNRPGP3-201ENST00000469405 227 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 RPS23P4-201ENST00000487908 423 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXC1Q12948 RNU2-34P-201ENST00000516534 121 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 RNU7-70P-201ENST00000516941 66 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 AC087499.8-201ENST00000578406 226 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 MIR6868-201ENST00000611215 58 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 AC006441.5-201ENST00000612680 209 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
FOXC1Q12948 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXC1Q12948 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXC1Q12948 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXC1Q12948 AC000123.3-201ENST00000624029 4975 ntBASIC3.9□□□□□ -1.79
FOXC1Q12948 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
FOXC1Q12948 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
FOXC1Q12948 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXC1Q12948 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
FOXC1Q12948 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXC1Q12948 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXC1Q12948 ZNF271P-202ENST00000465539 1970 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 MAPK10-349ENST00000641767 3661 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXC1Q12948 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
FOXC1Q12948 USP8P1-201ENST00000494673 3183 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXC1Q12948 MIR128-1-201ENST00000384921 82 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms