Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU6-1175P-201ENST00000365200 107 ntBASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.446-201ENST00000384178 104 ntBASIC2.35□□□□□ -2.03
LTBQ06643 MIR186-201ENST00000384988 86 ntBASIC2.35□□□□□ -2.03
LTBQ06643 RNA5SP201-201ENST00000410316 124 ntBASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
LTBQ06643 AL139156.1-201ENST00000412785 841 ntBASIC2.35□□□□□ -2.03
LTBQ06643 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.35□□□□□ -2.03
LTBQ06643 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.35□□□□□ -2.03
LTBQ06643 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.35□□□□□ -2.03
LTBQ06643 RPL23AP3-201ENST00000453844 468 ntBASIC2.35□□□□□ -2.03
LTBQ06643 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
LTBQ06643 AL441985.1-201ENST00000457727 251 ntBASIC2.35□□□□□ -2.03
LTBQ06643 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.35□□□□□ -2.03
LTBQ06643 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.683-201ENST00000516508 93 ntBASIC2.35□□□□□ -2.03
LTBQ06643 AC008749.1-201ENST00000597650 306 ntBASIC2.35□□□□□ -2.03
LTBQ06643 PCGEM1.1-201ENST00000613431 131 ntBASIC2.35□□□□□ -2.03
LTBQ06643 U2.14-201ENST00000615943 113 ntBASIC2.35□□□□□ -2.03
LTBQ06643 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LTBQ06643 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LTBQ06643 Z82195.2-201ENST00000612348 18351 ntBASIC2.35□□□□□ -2.03
LTBQ06643 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LTBQ06643 RNU6-727P-201ENST00000363592 107 ntBASIC2.34□□□□□ -2.03
LTBQ06643 Y_RNA.569-201ENST00000384749 103 ntBASIC2.34□□□□□ -2.03
LTBQ06643 FO393413.1-201ENST00000402892 195 ntBASIC2.34□□□□□ -2.03
LTBQ06643 RPL19P1-201ENST00000411635 428 ntBASIC2.34□□□□□ -2.03
LTBQ06643 ELOCP21-201ENST00000412558 336 ntBASIC2.34□□□□□ -2.03
LTBQ06643 Z98742.3-201ENST00000418637 326 ntBASIC2.34□□□□□ -2.03
LTBQ06643 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.34□□□□□ -2.03
LTBQ06643 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
LTBQ06643 SRIP1-201ENST00000489235 288 ntBASIC2.34□□□□□ -2.03
LTBQ06643 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
LTBQ06643 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
LTBQ06643 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.34□□□□□ -2.03
LTBQ06643 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.34□□□□□ -2.03
LTBQ06643 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
LTBQ06643 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LTBQ06643 AC026241.1-201ENST00000517873 2142 ntBASIC2.33□□□□□ -2.04
LTBQ06643 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LTBQ06643 Y_RNA.101-201ENST00000363154 102 ntBASIC2.33□□□□□ -2.04
LTBQ06643 SNORD56.5-201ENST00000364281 72 ntBASIC2.33□□□□□ -2.04
LTBQ06643 SNORA68.1-201ENST00000364537 132 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU4-56P-201ENST00000364700 142 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU6-326P-201ENST00000365480 107 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU6-209P-201ENST00000384118 107 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU6-21P-201ENST00000384710 107 ntBASIC2.33□□□□□ -2.04
LTBQ06643 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LTBQ06643 AL033519.2-201ENST00000403958 392 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNA5SP425-201ENST00000410336 112 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU6-651P-201ENST00000411040 105 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AC004866.1-201ENST00000411748 78 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AC007395.1-201ENST00000451333 677 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AL121594.1-201ENST00000475906 575 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU4-71P-201ENST00000516258 113 ntBASIC2.33□□□□□ -2.04
LTBQ06643 RNU2-31P-201ENST00000516954 155 ntBASIC2.33□□□□□ -2.04
LTBQ06643 SCARNA11.3-201ENST00000517276 130 ntBASIC2.33□□□□□ -2.04
LTBQ06643 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AP002001.1-203ENST00000534002 267 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AC079598.5-201ENST00000547460 117 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AC018448.1-201ENST00000552843 316 ntBASIC2.33□□□□□ -2.04
LTBQ06643 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
LTBQ06643 AC005176.2-201ENST00000596933 147 ntBASIC2.33□□□□□ -2.04
LTBQ06643 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.33□□□□□ -2.04
LTBQ06643 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.33□□□□□ -2.04
LTBQ06643 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.33□□□□□ -2.04
LTBQ06643 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LTBQ06643 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LTBQ06643 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
LTBQ06643 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LTBQ06643 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
LTBQ06643 Y_RNA.4-201ENST00000362333 112 ntBASIC2.32□□□□□ -2.04
LTBQ06643 snoU2_19.1-201ENST00000362361 80 ntBASIC2.32□□□□□ -2.04
LTBQ06643 Y_RNA.44-201ENST00000362676 108 ntBASIC2.32□□□□□ -2.04
LTBQ06643 Y_RNA.230-201ENST00000364348 109 ntBASIC2.32□□□□□ -2.04
LTBQ06643 RNU6-740P-201ENST00000364734 105 ntBASIC2.32□□□□□ -2.04
LTBQ06643 Y_RNA.297-201ENST00000364950 91 ntBASIC2.32□□□□□ -2.04
LTBQ06643 RNU6-245P-201ENST00000384020 107 ntBASIC2.32□□□□□ -2.04
LTBQ06643 Y_RNA.418-201ENST00000384029 102 ntBASIC2.32□□□□□ -2.04
LTBQ06643 SNORA53-201ENST00000391141 249 ntBASIC2.32□□□□□ -2.04
LTBQ06643 Z98742.2-201ENST00000431564 187 ntBASIC2.32□□□□□ -2.04
LTBQ06643 UQCRBP2-201ENST00000447827 297 ntBASIC2.32□□□□□ -2.04
LTBQ06643 RPL36AP48-201ENST00000485521 314 ntBASIC2.32□□□□□ -2.04
LTBQ06643 AC145146.1-201ENST00000496370 254 ntBASIC2.32□□□□□ -2.04
LTBQ06643 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
LTBQ06643 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.32□□□□□ -2.04
LTBQ06643 RPL21P9-201ENST00000556149 474 ntBASIC2.32□□□□□ -2.04
LTBQ06643 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.32□□□□□ -2.04
LTBQ06643 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
LTBQ06643 AC022441.3-201ENST00000605737 136 ntBASIC2.32□□□□□ -2.04
LTBQ06643 AL353997.5-201ENST00000618886 171 ntBASIC2.32□□□□□ -2.04
LTBQ06643 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.32□□□□□ -2.04
LTBQ06643 AL109809.4-201ENST00000603520 2185 ntBASIC2.32□□□□□ -2.04
LTBQ06643 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
LTBQ06643 RNU1-62P-201ENST00000362599 164 ntBASIC2.31□□□□□ -2.04
LTBQ06643 RNU6-655P-201ENST00000362858 107 ntBASIC2.31□□□□□ -2.04
LTBQ06643 Y_RNA.331-201ENST00000365267 102 ntBASIC2.31□□□□□ -2.04
LTBQ06643 Y_RNA.338-201ENST00000365320 114 ntBASIC2.31□□□□□ -2.04
LTBQ06643 Y_RNA.785-201ENST00000384290 109 ntBASIC2.31□□□□□ -2.04
LTBQ06643 Y_RNA.498-201ENST00000384460 102 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms