Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 TRBVB-201ENST00000477100 408 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 MIR4764-201ENST00000580680 88 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 AP001836.1-201ENST00000604675 523 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 AC068792.1-201ENST00000621354 417 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 AC008873.1-201ENST00000625051 138 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 AC099786.3-201ENST00000565735 1410 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 SNORD56.2-201ENST00000363242 71 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 SNORA8.2-201ENST00000384372 139 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 SNORA24.1-201ENST00000384401 135 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 SNORA2B-201ENST00000384583 137 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 RNU6-387P-201ENST00000411331 105 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 AL117339.3-201ENST00000418733 162 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 AC104692.1-201ENST00000472406 90 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 RNU7-41P-201ENST00000515917 61 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 RNA5SP268-201ENST00000516828 124 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 RNU6-685P-201ENST00000517088 95 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 AL078596.1-201ENST00000624856 447 ntBASIC-0.49□□□□□ -2.49
HIST1H1AQ02539 MIRLET7C-201ENST00000362160 84 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 RNA5SP457-201ENST00000363657 124 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 RNU6-929P-201ENST00000384429 107 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 MIR593-201ENST00000384856 100 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC004866.1-201ENST00000411748 78 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC087894.1-201ENST00000538359 518 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 MIR6779-201ENST00000617283 64 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 MIR7111-201ENST00000619751 72 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC068880.4-201ENST00000623082 495 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 AC005592.1-201ENST00000566527 1640 ntBASIC-0.5□□□□□ -2.49
HIST1H1AQ02539 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 RNU2-59P-201ENST00000410482 191 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 RNU2-8P-201ENST00000410727 190 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 AL353997.1-201ENST00000432936 108 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 RNU6-751P-201ENST00000516382 101 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 AP001372.4-201ENST00000524889 472 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 AC012467.1-201ENST00000607740 256 ntBASIC-0.51□□□□□ -2.49
HIST1H1AQ02539 RNU6-833P-201ENST00000363486 107 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 MIR562-201ENST00000384894 95 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 MIR329-2-201ENST00000385029 84 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 PCNPP3-201ENST00000393579 471 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 RPS26P42-201ENST00000413485 326 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 snoU13.6-201ENST00000458785 104 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 RNU2-46P-201ENST00000517038 113 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 AC027288.2-201ENST00000553028 243 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 AC138749.5-201ENST00000611461 208 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 AP000943.4-201ENST00000622912 357 ntBASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.52□□□□□ -2.49
HIST1H1AQ02539 RNA5SP325-201ENST00000363756 130 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 RNA5SP482-201ENST00000391269 118 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 RNA5SP95-201ENST00000410319 137 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AC137499.1-201ENST00000427602 88 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AL392103.1-201ENST00000447000 198 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 MTCO3P8-201ENST00000453691 755 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 HMGN2P26-201ENST00000463169 339 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 SCARNA8-201ENST00000515924 131 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 RNU2-56P-201ENST00000516826 190 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AK6P2-201ENST00000549020 471 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AC025449.1-201ENST00000603896 529 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AL139022.2-201ENST00000606934 443 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AC011155.2-201ENST00000623202 216 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 AL008636.1-201ENST00000625038 1018 ntBASIC-0.53□□□□□ -2.49
HIST1H1AQ02539 RNU6-61P-201ENST00000365528 109 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 SNORA67.2-201ENST00000384300 149 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 MIR520C-201ENST00000385005 87 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 MIR643-201ENST00000385267 97 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 RNU6-127P-201ENST00000390897 107 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 MIR891A-201ENST00000401237 79 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 RNU2-39P-201ENST00000410604 198 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 AC007327.1-201ENST00000447461 264 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 RNU6-977P-201ENST00000516411 103 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 RNU6-430P-201ENST00000517078 107 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 AC093027.1-201ENST00000546698 429 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 MIR4307-201ENST00000582802 84 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 AC068790.2-201ENST00000602601 557 ntBASIC-0.54□□□□□ -2.5
HIST1H1AQ02539 SNORD114-31-201ENST00000363219 75 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-756P-201ENST00000383997 107 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-747P-201ENST00000390928 104 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-241P-201ENST00000391148 104 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-613P-201ENST00000410412 108 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNA5SP337-201ENST00000517007 109 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms