Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AL357134.1-201ENST00000445848 426 ntBASIC1.64□□□□□ -2.15
SRPXP78539 UQCRBP2-201ENST00000447827 297 ntBASIC1.64□□□□□ -2.15
SRPXP78539 AL049873.1-201ENST00000480540 376 ntBASIC1.64□□□□□ -2.15
SRPXP78539 RNU6-107P-201ENST00000516643 102 ntBASIC1.64□□□□□ -2.15
SRPXP78539 RN7SKP49-201ENST00000516675 260 ntBASIC1.64□□□□□ -2.15
SRPXP78539 RNU6-1153P-201ENST00000516760 105 ntBASIC1.64□□□□□ -2.15
SRPXP78539 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
SRPXP78539 AC006157.1-201ENST00000611750 366 ntBASIC1.64□□□□□ -2.15
SRPXP78539 AC083806.3-201ENST00000614016 455 ntBASIC1.64□□□□□ -2.15
SRPXP78539 AC006001.4-201ENST00000622243 395 ntBASIC1.64□□□□□ -2.15
SRPXP78539 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.64□□□□□ -2.15
SRPXP78539 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.64□□□□□ -2.15
SRPXP78539 AL159152.1-201ENST00000635019 2587 ntBASIC1.64□□□□□ -2.15
SRPXP78539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SRPXP78539 Y_RNA.112-201ENST00000363250 102 ntBASIC1.63□□□□□ -2.15
SRPXP78539 Y_RNA.445-201ENST00000384168 102 ntBASIC1.63□□□□□ -2.15
SRPXP78539 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SRPXP78539 Y_RNA.595-201ENST00000410403 105 ntBASIC1.63□□□□□ -2.15
SRPXP78539 SNORD12B-201ENST00000410433 91 ntBASIC1.63□□□□□ -2.15
SRPXP78539 ELOCP21-201ENST00000412558 336 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AC016909.1-201ENST00000415916 166 ntBASIC1.63□□□□□ -2.15
SRPXP78539 PMCHL1-202ENST00000423102 261 ntBASIC1.63□□□□□ -2.15
SRPXP78539 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.63□□□□□ -2.15
SRPXP78539 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.63□□□□□ -2.15
SRPXP78539 UBE2V1P7-201ENST00000446395 340 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.63□□□□□ -2.15
SRPXP78539 RNU1-131P-201ENST00000458943 161 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AP001486.1-201ENST00000463339 476 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AC114982.1-201ENST00000469402 321 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AC067942.3-201ENST00000512025 362 ntBASIC1.63□□□□□ -2.15
SRPXP78539 RNU6-1041P-201ENST00000516254 102 ntBASIC1.63□□□□□ -2.15
SRPXP78539 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AP002001.1-203ENST00000534002 267 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AP002770.2-201ENST00000543613 532 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.63□□□□□ -2.15
SRPXP78539 MIR3162-201ENST00000581818 82 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AC007229.1-201ENST00000590455 412 ntBASIC1.63□□□□□ -2.15
SRPXP78539 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
SRPXP78539 AC011476.5-201ENST00000615594 130 ntBASIC1.63□□□□□ -2.15
SRPXP78539 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.63□□□□□ -2.15
SRPXP78539 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SRPXP78539 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.62□□□□□ -2.15
SRPXP78539 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SRPXP78539 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
SRPXP78539 Y_RNA.216-201ENST00000364205 93 ntBASIC1.62□□□□□ -2.15
SRPXP78539 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
SRPXP78539 MIR628-201ENST00000385229 95 ntBASIC1.62□□□□□ -2.15
SRPXP78539 SNORA40.19-201ENST00000390846 128 ntBASIC1.62□□□□□ -2.15
SRPXP78539 RNA5SP465-201ENST00000391195 109 ntBASIC1.62□□□□□ -2.15
SRPXP78539 RNA5SP501-201ENST00000410990 112 ntBASIC1.62□□□□□ -2.15
SRPXP78539 MTCO2P12-201ENST00000427426 682 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.62□□□□□ -2.15
SRPXP78539 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AC010469.2-201ENST00000496412 480 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.62□□□□□ -2.15
SRPXP78539 SNORA40.9-201ENST00000515895 93 ntBASIC1.62□□□□□ -2.15
SRPXP78539 RNU6-948P-201ENST00000516374 107 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.62□□□□□ -2.15
SRPXP78539 AL442163.3-201ENST00000554110 156 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.62□□□□□ -2.15
SRPXP78539 MIR5188-201ENST00000583467 113 ntBASIC1.62□□□□□ -2.15
SRPXP78539 AL109918.3-201ENST00000603072 338 ntBASIC1.62□□□□□ -2.15
SRPXP78539 SDR42E1P4-201ENST00000620894 481 ntBASIC1.62□□□□□ -2.15
SRPXP78539 MIR6873-201ENST00000622788 63 ntBASIC1.62□□□□□ -2.15
SRPXP78539 snoZ196.1-201ENST00000625269 89 ntBASIC1.62□□□□□ -2.15
SRPXP78539 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.62□□□□□ -2.15
SRPXP78539 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
SRPXP78539 ZNF702P-202ENST00000434269 1966 ntBASIC1.61□□□□□ -2.15
SRPXP78539 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.61□□□□□ -2.15
SRPXP78539 U3.8-201ENST00000363675 217 ntBASIC1.61□□□□□ -2.15
SRPXP78539 RPS20P15-201ENST00000412792 311 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AL354751.2-201ENST00000415471 210 ntBASIC1.61□□□□□ -2.15
SRPXP78539 MCFD2P1-201ENST00000417812 300 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AL160004.2-201ENST00000432935 350 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AC099677.2-201ENST00000436385 175 ntBASIC1.61□□□□□ -2.15
SRPXP78539 MTND4P19-201ENST00000446659 478 ntBASIC1.61□□□□□ -2.15
SRPXP78539 PCNPP5-201ENST00000452246 481 ntBASIC1.61□□□□□ -2.15
SRPXP78539 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.61□□□□□ -2.15
SRPXP78539 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.61□□□□□ -2.15
SRPXP78539 RN7SKP295-201ENST00000517264 153 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AC018448.1-201ENST00000552843 316 ntBASIC1.61□□□□□ -2.15
SRPXP78539 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
SRPXP78539 VN1R91P-201ENST00000594377 169 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.61□□□□□ -2.15
SRPXP78539 AL096840.1-201ENST00000603287 93 ntBASIC1.61□□□□□ -2.15
SRPXP78539 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AC243829.7-201ENST00000633081 225 ntBASIC1.61□□□□□ -2.15
SRPXP78539 AL606534.2-204ENST00000635008 178 ntBASIC1.61□□□□□ -2.15
SRPXP78539 U6.92-201ENST00000636464 89 ntBASIC1.61□□□□□ -2.15
SRPXP78539 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
SRPXP78539 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SRPXP78539 AC091812.1-201ENST00000432235 1948 ntBASIC1.6□□□□□ -2.15
SRPXP78539 Y_RNA.39-201ENST00000362620 98 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU6-862P-201ENST00000362804 105 ntBASIC1.6□□□□□ -2.15
SRPXP78539 Y_RNA.148-201ENST00000363557 117 ntBASIC1.6□□□□□ -2.15
SRPXP78539 SNORA33-201ENST00000363664 130 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU6-961P-201ENST00000363893 105 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU1-115P-201ENST00000365329 160 ntBASIC1.6□□□□□ -2.15
SRPXP78539 MIR1185-2-201ENST00000408687 86 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms