Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ERVFC1P60507 AC017071.1-201ENST00000564407 2204 ntBASIC3.37□□□□□ -1.87
ERVFC1P60507 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ERVFC1P60507 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ERVFC1P60507 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.36□□□□□ -1.87
ERVFC1P60507 SNORD114-7-201ENST00000362520 77 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU4-15P-201ENST00000362613 141 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU6-529P-201ENST00000363383 104 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU6-1205P-201ENST00000363625 106 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 U3.9-201ENST00000363823 204 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 SNORA71.1-201ENST00000364523 117 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU6-855P-201ENST00000410395 104 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU4-43P-201ENST00000410628 137 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 AL365496.1-201ENST00000426885 215 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 RNU7-141P-201ENST00000459304 62 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.36□□□□□ -1.87
ERVFC1P60507 RPS15AP11-201ENST00000594193 385 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 AC011603.4-201ENST00000611325 277 ntBASIC3.36□□□□□ -1.87
ERVFC1P60507 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.36□□□□□ -1.87
ERVFC1P60507 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ERVFC1P60507 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ERVFC1P60507 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ERVFC1P60507 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ERVFC1P60507 MIR449A-201ENST00000362113 91 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 Y_RNA.40-201ENST00000362645 93 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 U3.8-201ENST00000363675 217 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 Y_RNA.229-201ENST00000364347 113 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 RNA5SP126-201ENST00000365092 109 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 RNU6-407P-201ENST00000365280 104 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 RNU6-301P-201ENST00000384277 107 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 MIR15B-201ENST00000385045 98 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 SNORD37.2-201ENST00000391075 66 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.35□□□□□ -1.87
ERVFC1P60507 AC245047.8-201ENST00000456455 284 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 RNA5SP310-201ENST00000459084 116 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 AC107626.1-201ENST00000471084 183 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
ERVFC1P60507 PDCD5P2-201ENST00000507570 312 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 SNORA70.12-201ENST00000516084 153 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.35□□□□□ -1.87
ERVFC1P60507 U7.2-201ENST00000607576 63 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 AC110774.1-201ENST00000623567 2018 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 AL035425.3-201ENST00000564206 4996 ntBASIC3.35□□□□□ -1.87
ERVFC1P60507 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ERVFC1P60507 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
ERVFC1P60507 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ERVFC1P60507 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ERVFC1P60507 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ERVFC1P60507 Y_RNA.251-201ENST00000364551 99 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 RNU6-728P-201ENST00000365375 104 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 RNY3P5-201ENST00000384127 102 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 RNU6-19P-201ENST00000384718 107 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC023141.4-201ENST00000412031 328 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC002075.2-201ENST00000425207 252 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC027124.2-201ENST00000428249 105 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.34□□□□□ -1.87
ERVFC1P60507 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC006445.2-201ENST00000510061 472 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AP001328.1-201ENST00000528550 176 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR4738-201ENST00000579134 87 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR4724-201ENST00000579485 89 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR3609-201ENST00000582661 80 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR5006-201ENST00000583027 110 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 AC073308.1-201ENST00000623696 305 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR6844-201ENST00000637122 62 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
ERVFC1P60507 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ERVFC1P60507 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
ERVFC1P60507 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.88
ERVFC1P60507 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ERVFC1P60507 Y_RNA.393-201ENST00000383936 102 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 RNU6-768P-201ENST00000384683 107 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 MT-TT-201ENST00000387460 66 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 RNY4P18-201ENST00000391107 89 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 AL606845.1-201ENST00000404881 255 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 RNU6-1064P-201ENST00000410626 104 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
ERVFC1P60507 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.33□□□□□ -1.88
ERVFC1P60507 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
ERVFC1P60507 RPS27P1-201ENST00000450552 247 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 RNA5SP356-201ENST00000515972 94 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 Y_RNA.712-201ENST00000517011 92 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.33□□□□□ -1.88
ERVFC1P60507 AC025754.2-201ENST00000606491 432 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.33□□□□□ -1.88
ERVFC1P60507 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
ERVFC1P60507 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ERVFC1P60507 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ERVFC1P60507 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.32□□□□□ -1.88
ERVFC1P60507 AC000403.1-201ENST00000613696 3585 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms