Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN6P56747 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN6P56747 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
CLDN6P56747 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
CLDN6P56747 AL390123.1-201ENST00000603216 237 ntBASIC0.81□□□□□ -2.28
CLDN6P56747 AC092747.3-201ENST00000603769 301 ntBASIC0.81□□□□□ -2.28
CLDN6P56747 AL357078.3-201ENST00000607528 618 ntBASIC0.81□□□□□ -2.28
CLDN6P56747 RNU6-505P-201ENST00000384427 107 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 SNORD37.1-201ENST00000390968 65 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CLDN6P56747 AC073464.1-201ENST00000429823 534 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 RNU6-221P-201ENST00000459541 99 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 SRRM1P2-201ENST00000464531 1192 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 MTCO3P38-201ENST00000468910 766 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN6P56747 SCARNA16.2-201ENST00000516520 172 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 MTND1P35-201ENST00000526739 508 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN6P56747 AC103705.1-201ENST00000619013 241 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 SNORD3E-202ENST00000627253 216 ntBASIC0.8□□□□□ -2.28
CLDN6P56747 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CLDN6P56747 RNU4-79P-201ENST00000362764 141 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 Y_RNA.381-201ENST00000365666 102 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 SNORA67.2-201ENST00000384300 149 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 MIR19B1-201ENST00000384829 87 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 MIR521-1-201ENST00000384902 87 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 MIR487A-201ENST00000385009 80 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 RNU6-1158P-201ENST00000391167 107 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 RNU6-1186P-201ENST00000410429 97 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDN6P56747 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDN6P56747 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 RNU6-1038P-201ENST00000516516 104 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 RNU6-344P-201ENST00000516635 111 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDN6P56747 AC133485.1-201ENST00000567176 124 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC138907.6-201ENST00000568401 126 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC087683.1-201ENST00000591187 441 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 AC137590.2-201ENST00000619709 240 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
CLDN6P56747 Y_RNA.169-201ENST00000363745 96 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 RNU6-440P-201ENST00000390882 105 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CLDN6P56747 MIR450B-201ENST00000401182 78 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 MRPL42P3-201ENST00000401492 326 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AL049545.1-201ENST00000401856 572 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AL034345.1-201ENST00000407768 123 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 RNU6-325P-201ENST00000411132 105 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 RN7SKP142-201ENST00000411236 328 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.78□□□□□ -2.28
CLDN6P56747 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.78□□□□□ -2.28
CLDN6P56747 AC063976.4-201ENST00000421971 163 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 MTND3P7-201ENST00000474435 343 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN6P56747 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN6P56747 AL157687.1-201ENST00000554853 619 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 MIR1273G-201ENST00000577677 100 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AL513534.2-201ENST00000603836 250 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AL121757.2-201ENST00000611223 313 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 AL513423.1-201ENST00000621695 132 ntBASIC0.78□□□□□ -2.28
CLDN6P56747 RNU6-82P-201ENST00000363970 107 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 RNU4-76P-201ENST00000364509 141 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.77□□□□□ -2.29
CLDN6P56747 MRPS10P2-201ENST00000431226 381 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 AL359672.1-201ENST00000442302 409 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.77□□□□□ -2.29
CLDN6P56747 HMGB1P29-201ENST00000505659 499 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 AC105758.1-201ENST00000506038 399 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 SNORA19.2-201ENST00000516013 114 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 RNA5SP454-201ENST00000517231 127 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.77□□□□□ -2.29
CLDN6P56747 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 SNORD11B-201ENST00000607707 90 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 MIR8076-201ENST00000611401 83 ntBASIC0.77□□□□□ -2.29
CLDN6P56747 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
CLDN6P56747 Y_RNA.115-201ENST00000363272 98 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RNU6-348P-201ENST00000384386 107 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RNU6-933P-201ENST00000384424 107 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RNY3P9-201ENST00000384727 106 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RNA5SP504-201ENST00000410676 117 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 AL663109.1-201ENST00000411498 844 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.76□□□□□ -2.29
CLDN6P56747 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.76□□□□□ -2.29
CLDN6P56747 RNA5SP168-201ENST00000516642 112 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 AL118558.2-201ENST00000556294 238 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 MIR4528-201ENST00000577763 90 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 MIR5692C1-201ENST00000585309 91 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
CLDN6P56747 GHRLOS.1-201ENST00000610995 70 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms