Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 Y_RNA.136-201ENST00000363444 102 ntBASIC2.79□□□□□ -1.96
PER3P56645 U3.8-201ENST00000363675 217 ntBASIC2.79□□□□□ -1.96
PER3P56645 RNU6-1305P-201ENST00000364353 104 ntBASIC2.79□□□□□ -1.96
PER3P56645 SNORA53-201ENST00000391141 249 ntBASIC2.79□□□□□ -1.96
PER3P56645 RNU2-48P-201ENST00000410694 191 ntBASIC2.79□□□□□ -1.96
PER3P56645 RNA5SP229-201ENST00000410809 99 ntBASIC2.79□□□□□ -1.96
PER3P56645 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.79□□□□□ -1.96
PER3P56645 MTCO1P5-201ENST00000433573 344 ntBASIC2.79□□□□□ -1.96
PER3P56645 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
PER3P56645 NDUFB4P10-201ENST00000452541 359 ntBASIC2.79□□□□□ -1.96
PER3P56645 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
PER3P56645 RNU6-155P-201ENST00000516347 100 ntBASIC2.79□□□□□ -1.96
PER3P56645 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
PER3P56645 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
PER3P56645 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.79□□□□□ -1.96
PER3P56645 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.96
PER3P56645 Y_RNA.54-201ENST00000362766 105 ntBASIC2.78□□□□□ -1.96
PER3P56645 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
PER3P56645 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PER3P56645 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
PER3P56645 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
PER3P56645 POLR2KP2-201ENST00000438155 177 ntBASIC2.78□□□□□ -1.96
PER3P56645 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
PER3P56645 AL139109.1-201ENST00000455491 297 ntBASIC2.78□□□□□ -1.96
PER3P56645 RPS29P26-201ENST00000477483 171 ntBASIC2.78□□□□□ -1.96
PER3P56645 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.78□□□□□ -1.96
PER3P56645 RN7SKP43-201ENST00000516173 320 ntBASIC2.78□□□□□ -1.96
PER3P56645 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.78□□□□□ -1.96
PER3P56645 RPL21P9-201ENST00000556149 474 ntBASIC2.78□□□□□ -1.96
PER3P56645 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PER3P56645 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.78□□□□□ -1.96
PER3P56645 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.78□□□□□ -1.96
PER3P56645 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PER3P56645 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
PER3P56645 Z82209.1-201ENST00000422141 2135 ntBASIC2.78□□□□□ -1.96
PER3P56645 MIR181B1-201ENST00000385240 110 ntBASIC2.77□□□□□ -1.97
PER3P56645 MT-TR-201ENST00000387439 65 ntBASIC2.77□□□□□ -1.97
PER3P56645 MIR1283-1-201ENST00000408494 87 ntBASIC2.77□□□□□ -1.97
PER3P56645 RNA5SP508-201ENST00000411327 119 ntBASIC2.77□□□□□ -1.97
PER3P56645 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
PER3P56645 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
PER3P56645 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
PER3P56645 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
PER3P56645 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.77□□□□□ -1.97
PER3P56645 MIR3145-201ENST00000580727 82 ntBASIC2.77□□□□□ -1.97
PER3P56645 AL356280.1-201ENST00000603614 379 ntBASIC2.77□□□□□ -1.97
PER3P56645 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PER3P56645 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.77□□□□□ -1.97
PER3P56645 AC092593.1-201ENST00000515413 1815 ntBASIC2.77□□□□□ -1.97
PER3P56645 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PER3P56645 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PER3P56645 MIR22-201ENST00000362190 85 ntBASIC2.76□□□□□ -1.97
PER3P56645 Y_RNA.44-201ENST00000362676 108 ntBASIC2.76□□□□□ -1.97
PER3P56645 Y_RNA.65-201ENST00000362846 100 ntBASIC2.76□□□□□ -1.97
PER3P56645 Y_RNA.269-201ENST00000364685 89 ntBASIC2.76□□□□□ -1.97
PER3P56645 RNU6-651P-201ENST00000411040 105 ntBASIC2.76□□□□□ -1.97
PER3P56645 RNU2-32P-201ENST00000411193 191 ntBASIC2.76□□□□□ -1.97
PER3P56645 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
PER3P56645 AC003685.2-201ENST00000422795 395 ntBASIC2.76□□□□□ -1.97
PER3P56645 TOMM22P2-201ENST00000430735 237 ntBASIC2.76□□□□□ -1.97
PER3P56645 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
PER3P56645 AC105272.1-201ENST00000438604 198 ntBASIC2.76□□□□□ -1.97
PER3P56645 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.76□□□□□ -1.97
PER3P56645 RNU6-436P-201ENST00000516171 114 ntBASIC2.76□□□□□ -1.97
PER3P56645 SNORA48.11-201ENST00000517015 89 ntBASIC2.76□□□□□ -1.97
PER3P56645 AC022616.8-201ENST00000533569 253 ntBASIC2.76□□□□□ -1.97
PER3P56645 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
PER3P56645 BX284668.6-201ENST00000606899 438 ntBASIC2.76□□□□□ -1.97
PER3P56645 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PER3P56645 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
PER3P56645 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PER3P56645 Y_RNA.76-201ENST00000362931 109 ntBASIC2.75□□□□□ -1.97
PER3P56645 SNORD115-30-201ENST00000364117 82 ntBASIC2.75□□□□□ -1.97
PER3P56645 RNY1-201ENST00000364228 113 ntBASIC2.75□□□□□ -1.97
PER3P56645 RNU6-740P-201ENST00000364734 105 ntBASIC2.75□□□□□ -1.97
PER3P56645 RNU6-546P-201ENST00000383991 107 ntBASIC2.75□□□□□ -1.97
PER3P56645 SNORD67-201ENST00000390833 111 ntBASIC2.75□□□□□ -1.97
PER3P56645 MIR1185-2-201ENST00000408687 86 ntBASIC2.75□□□□□ -1.97
PER3P56645 U3.40-201ENST00000408706 208 ntBASIC2.75□□□□□ -1.97
PER3P56645 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
PER3P56645 AC091959.1-201ENST00000495857 238 ntBASIC2.75□□□□□ -1.97
PER3P56645 PRELID2P1-201ENST00000552837 301 ntBASIC2.75□□□□□ -1.97
PER3P56645 DEFB117-201ENST00000602356 141 ntBASIC2.75□□□□□ -1.97
PER3P56645 AC009779.6-201ENST00000603972 165 ntBASIC2.75□□□□□ -1.97
PER3P56645 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PER3P56645 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PER3P56645 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PER3P56645 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
PER3P56645 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PER3P56645 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PER3P56645 UBE2WP1-201ENST00000362030 340 ntBASIC2.74□□□□□ -1.97
PER3P56645 SNORA25.1-201ENST00000362326 128 ntBASIC2.74□□□□□ -1.97
PER3P56645 RNU4-80P-201ENST00000363200 141 ntBASIC2.74□□□□□ -1.97
PER3P56645 Y_RNA.243-201ENST00000364481 109 ntBASIC2.74□□□□□ -1.97
PER3P56645 SNORD31B-201ENST00000364977 69 ntBASIC2.74□□□□□ -1.97
PER3P56645 Y_RNA.329-201ENST00000365209 107 ntBASIC2.74□□□□□ -1.97
PER3P56645 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PER3P56645 MIR300-201ENST00000401138 83 ntBASIC2.74□□□□□ -1.97
PER3P56645 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
PER3P56645 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms