Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.376-201ENST00000365638 108 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-1264P-201ENST00000383891 107 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-472P-201ENST00000384299 107 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-1026P-201ENST00000384465 108 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-102P-201ENST00000384485 104 ntBASIC2.22□□□□□ -2.05
CDH12P55289 Y_RNA.570-201ENST00000384750 101 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-713P-201ENST00000384761 107 ntBASIC2.22□□□□□ -2.05
CDH12P55289 MIR196B-201ENST00000384852 84 ntBASIC2.22□□□□□ -2.05
CDH12P55289 MT-TW-201ENST00000387382 68 ntBASIC2.22□□□□□ -2.05
CDH12P55289 SNORA11.1-201ENST00000408133 129 ntBASIC2.22□□□□□ -2.05
CDH12P55289 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH12P55289 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH12P55289 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
CDH12P55289 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH12P55289 AC108938.1-201ENST00000451204 136 ntBASIC2.22□□□□□ -2.05
CDH12P55289 AC016925.1-201ENST00000458303 298 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-991P-201ENST00000516168 107 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU6-107P-201ENST00000516643 102 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNA5SP490-201ENST00000517141 136 ntBASIC2.22□□□□□ -2.05
CDH12P55289 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
CDH12P55289 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH12P55289 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH12P55289 AC005176.2-201ENST00000596933 147 ntBASIC2.22□□□□□ -2.05
CDH12P55289 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
CDH12P55289 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH12P55289 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CDH12P55289 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH12P55289 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH12P55289 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH12P55289 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH12P55289 MIR410-201ENST00000362222 80 ntBASIC2.21□□□□□ -2.06
CDH12P55289 Y_RNA.101-201ENST00000363154 102 ntBASIC2.21□□□□□ -2.06
CDH12P55289 SNORD113-8-201ENST00000363497 74 ntBASIC2.21□□□□□ -2.06
CDH12P55289 U3.8-201ENST00000363675 217 ntBASIC2.21□□□□□ -2.06
CDH12P55289 Y_RNA.193-201ENST00000363979 102 ntBASIC2.21□□□□□ -2.06
CDH12P55289 RNU6-454P-201ENST00000364292 107 ntBASIC2.21□□□□□ -2.06
CDH12P55289 Y_RNA.452-201ENST00000384202 108 ntBASIC2.21□□□□□ -2.06
CDH12P55289 MIR518C-201ENST00000384822 101 ntBASIC2.21□□□□□ -2.06
CDH12P55289 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
CDH12P55289 RNU4-30P-201ENST00000410245 143 ntBASIC2.21□□□□□ -2.06
CDH12P55289 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH12P55289 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH12P55289 RNA5SP356-201ENST00000515972 94 ntBASIC2.21□□□□□ -2.06
CDH12P55289 RNU6-570P-201ENST00000517051 105 ntBASIC2.21□□□□□ -2.06
CDH12P55289 MIR3149-201ENST00000584629 83 ntBASIC2.21□□□□□ -2.06
CDH12P55289 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH12P55289 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
CDH12P55289 AC004467.1-201ENST00000615678 330 ntBASIC2.21□□□□□ -2.06
CDH12P55289 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
CDH12P55289 U4.1-201ENST00000620349 87 ntBASIC2.21□□□□□ -2.06
CDH12P55289 AC091932.3-201ENST00000624223 323 ntBASIC2.21□□□□□ -2.06
CDH12P55289 MIR3674-201ENST00000636576 68 ntBASIC2.21□□□□□ -2.06
CDH12P55289 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.2□□□□□ -2.06
CDH12P55289 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.84-201ENST00000363011 104 ntBASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.230-201ENST00000364348 109 ntBASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.286-201ENST00000364813 102 ntBASIC2.2□□□□□ -2.06
CDH12P55289 RNU6-1175P-201ENST00000365200 107 ntBASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.461-201ENST00000384263 103 ntBASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.483-201ENST00000384380 101 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AL357139.1-201ENST00000407792 426 ntBASIC2.2□□□□□ -2.06
CDH12P55289 MIR1302-3-201ENST00000408128 138 ntBASIC2.2□□□□□ -2.06
CDH12P55289 Y_RNA.602-201ENST00000410535 92 ntBASIC2.2□□□□□ -2.06
CDH12P55289 RNU5A-5P-201ENST00000411054 116 ntBASIC2.2□□□□□ -2.06
CDH12P55289 RNA5SP184-201ENST00000411071 108 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AC009238.1-201ENST00000442165 424 ntBASIC2.2□□□□□ -2.06
CDH12P55289 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH12P55289 AC009237.6-201ENST00000446969 424 ntBASIC2.2□□□□□ -2.06
CDH12P55289 NDUFB4P10-201ENST00000452541 359 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AL109933.2-201ENST00000452651 260 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CDH12P55289 AC093259.1-201ENST00000509755 300 ntBASIC2.2□□□□□ -2.06
CDH12P55289 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH12P55289 MIR4753-201ENST00000585119 83 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AC025754.2-201ENST00000606491 432 ntBASIC2.2□□□□□ -2.06
CDH12P55289 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
CDH12P55289 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH12P55289 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CDH12P55289 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.19□□□□□ -2.06
CDH12P55289 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDH12P55289 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
CDH12P55289 MIR340-201ENST00000362125 95 ntBASIC2.19□□□□□ -2.06
CDH12P55289 RNU6-438P-201ENST00000365561 103 ntBASIC2.19□□□□□ -2.06
CDH12P55289 RNU6-505P-201ENST00000384427 107 ntBASIC2.19□□□□□ -2.06
CDH12P55289 Y_RNA.581-201ENST00000391017 97 ntBASIC2.19□□□□□ -2.06
CDH12P55289 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
CDH12P55289 RNU6-1199P-201ENST00000411249 104 ntBASIC2.19□□□□□ -2.06
CDH12P55289 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH12P55289 RPL23AP83-201ENST00000434984 473 ntBASIC2.19□□□□□ -2.06
CDH12P55289 AC016717.1-201ENST00000448918 286 ntBASIC2.19□□□□□ -2.06
CDH12P55289 RPL23AP3-201ENST00000453844 468 ntBASIC2.19□□□□□ -2.06
CDH12P55289 HSPE1P25-201ENST00000455484 251 ntBASIC2.19□□□□□ -2.06
CDH12P55289 RNU6-496P-201ENST00000516145 99 ntBASIC2.19□□□□□ -2.06
CDH12P55289 Y_RNA.668-201ENST00000516233 93 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms