Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-438P-201ENST00000365561 103 ntBASIC2.57□□□□□ -2
COPAP53621 RNU6-713P-201ENST00000384761 107 ntBASIC2.57□□□□□ -2
COPAP53621 Y_RNA.574-201ENST00000384766 95 ntBASIC2.57□□□□□ -2
COPAP53621 RNU6-1109P-201ENST00000391187 107 ntBASIC2.57□□□□□ -2
COPAP53621 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
COPAP53621 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
COPAP53621 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.57□□□□□ -2
COPAP53621 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
COPAP53621 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
COPAP53621 ATP5EP1-201ENST00000510257 156 ntBASIC2.57□□□□□ -2
COPAP53621 SNORA40.9-201ENST00000515895 93 ntBASIC2.57□□□□□ -2
COPAP53621 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.57□□□□□ -2
COPAP53621 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
COPAP53621 CYCSP26-201ENST00000534107 320 ntBASIC2.57□□□□□ -2
COPAP53621 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.57□□□□□ -2
COPAP53621 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
COPAP53621 SNORD53-201ENST00000579969 78 ntBASIC2.57□□□□□ -2
COPAP53621 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.57□□□□□ -2
COPAP53621 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
COPAP53621 AC130454.1-201ENST00000622948 401 ntBASIC2.57□□□□□ -2
COPAP53621 AC064859.1-201ENST00000624741 174 ntBASIC2.57□□□□□ -2
COPAP53621 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
COPAP53621 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
COPAP53621 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.57□□□□□ -2
COPAP53621 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
COPAP53621 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
COPAP53621 RNA5SP289-201ENST00000362332 137 ntBASIC2.56□□□□□ -2
COPAP53621 Y_RNA.47-201ENST00000362697 108 ntBASIC2.56□□□□□ -2
COPAP53621 Y_RNA.144-201ENST00000363521 113 ntBASIC2.56□□□□□ -2
COPAP53621 AL079342.1-201ENST00000401460 267 ntBASIC2.56□□□□□ -2
COPAP53621 RNU2-48P-201ENST00000410694 191 ntBASIC2.56□□□□□ -2
COPAP53621 RNU6-130P-201ENST00000411112 103 ntBASIC2.56□□□□□ -2
COPAP53621 RNA5SP270-201ENST00000411361 118 ntBASIC2.56□□□□□ -2
COPAP53621 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
COPAP53621 HMGN2P18-201ENST00000450680 270 ntBASIC2.56□□□□□ -2
COPAP53621 MTCO2P24-201ENST00000515611 426 ntBASIC2.56□□□□□ -2
COPAP53621 AC074133.1-201ENST00000515696 183 ntBASIC2.56□□□□□ -2
COPAP53621 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
COPAP53621 RNU6-991P-201ENST00000516168 107 ntBASIC2.56□□□□□ -2
COPAP53621 RRN3P3-201ENST00000549207 578 ntBASIC2.56□□□□□ -2
COPAP53621 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.56□□□□□ -2
COPAP53621 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.56□□□□□ -2
COPAP53621 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
COPAP53621 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COPAP53621 RNU6-545P-201ENST00000362681 104 ntBASIC2.55□□□□□ -2
COPAP53621 RNU6-770P-201ENST00000363929 105 ntBASIC2.55□□□□□ -2
COPAP53621 Y_RNA.214-201ENST00000364201 112 ntBASIC2.55□□□□□ -2
COPAP53621 RNU6-1305P-201ENST00000364353 104 ntBASIC2.55□□□□□ -2
COPAP53621 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
COPAP53621 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
COPAP53621 RNU6-196P-201ENST00000384315 107 ntBASIC2.55□□□□□ -2
COPAP53621 Y_RNA.498-201ENST00000384460 102 ntBASIC2.55□□□□□ -2
COPAP53621 RPL21P1-201ENST00000399532 476 ntBASIC2.55□□□□□ -2
COPAP53621 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
COPAP53621 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
COPAP53621 MTCYBP9-201ENST00000431021 303 ntBASIC2.55□□□□□ -2
COPAP53621 AL731563.1-201ENST00000442202 214 ntBASIC2.55□□□□□ -2
COPAP53621 DYNLT3P2-201ENST00000442517 295 ntBASIC2.55□□□□□ -2
COPAP53621 RNU6-408P-201ENST00000515910 100 ntBASIC2.55□□□□□ -2
COPAP53621 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
COPAP53621 AC025754.2-201ENST00000606491 432 ntBASIC2.55□□□□□ -2
COPAP53621 AL357075.2-201ENST00000614906 189 ntBASIC2.55□□□□□ -2
COPAP53621 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COPAP53621 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.54□□□□□ -2
COPAP53621 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
COPAP53621 Y_RNA.19-201ENST00000362462 99 ntBASIC2.54□□□□□ -2
COPAP53621 Y_RNA.143-201ENST00000363520 106 ntBASIC2.54□□□□□ -2
COPAP53621 Y_RNA.415-201ENST00000384012 112 ntBASIC2.54□□□□□ -2
COPAP53621 SNORA70B-201ENST00000384210 135 ntBASIC2.54□□□□□ -2
COPAP53621 MIR300-201ENST00000401138 83 ntBASIC2.54□□□□□ -2
COPAP53621 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
COPAP53621 SNORA3.2-201ENST00000408221 125 ntBASIC2.54□□□□□ -2
COPAP53621 MIR1261-201ENST00000408659 82 ntBASIC2.54□□□□□ -2
COPAP53621 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.54□□□□□ -2
COPAP53621 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.54□□□□□ -2
COPAP53621 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.54□□□□□ -2
COPAP53621 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.54□□□□□ -2
COPAP53621 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.54□□□□□ -2
COPAP53621 RNU6-625P-201ENST00000459412 107 ntBASIC2.54□□□□□ -2
COPAP53621 RNU6-107P-201ENST00000516643 102 ntBASIC2.54□□□□□ -2
COPAP53621 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
COPAP53621 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.54□□□□□ -2
COPAP53621 AC018448.1-201ENST00000552843 316 ntBASIC2.54□□□□□ -2
COPAP53621 AC233702.2-202ENST00000562547 291 ntBASIC2.54□□□□□ -2
COPAP53621 MIR4753-201ENST00000585119 83 ntBASIC2.54□□□□□ -2
COPAP53621 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.54□□□□□ -2
COPAP53621 MIR6840-201ENST00000611937 71 ntBASIC2.54□□□□□ -2
COPAP53621 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
COPAP53621 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.54□□□□□ -2
COPAP53621 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
COPAP53621 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COPAP53621 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
COPAP53621 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
COPAP53621 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COPAP53621 SNORD87-201ENST00000364849 89 ntBASIC2.53□□□□□ -2
COPAP53621 RNU6-463P-201ENST00000384340 107 ntBASIC2.53□□□□□ -2
COPAP53621 MIR1283-1-201ENST00000408494 87 ntBASIC2.53□□□□□ -2
COPAP53621 PRELID2P1-201ENST00000552837 301 ntBASIC2.53□□□□□ -2
COPAP53621 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.53□□□□□ -2
COPAP53621 MIR5694-201ENST00000581190 76 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms