Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AL359881.1-201ENST00000602916 267 ntBASIC3.34□□□□□ -1.87
CDR1P51861 AC013791.1-201ENST00000616619 62 ntBASIC3.34□□□□□ -1.87
CDR1P51861 AL137790.1-201ENST00000634283 177 ntBASIC3.34□□□□□ -1.87
CDR1P51861 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.33□□□□□ -1.88
CDR1P51861 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDR1P51861 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDR1P51861 AC002543.1-201ENST00000299783 1954 ntBASIC3.33□□□□□ -1.88
CDR1P51861 Y_RNA.71-201ENST00000362892 104 ntBASIC3.33□□□□□ -1.88
CDR1P51861 snoU2_19.4-201ENST00000364329 80 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORD116-14-201ENST00000383894 92 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORD116-17-201ENST00000383929 92 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORA54-201ENST00000384281 123 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORD116-15-201ENST00000384445 92 ntBASIC3.33□□□□□ -1.88
CDR1P51861 Y_RNA.510-201ENST00000384511 114 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORD116-19-201ENST00000384729 92 ntBASIC3.33□□□□□ -1.88
CDR1P51861 RNU6-376P-201ENST00000384731 106 ntBASIC3.33□□□□□ -1.88
CDR1P51861 SNORA26.5-201ENST00000391215 123 ntBASIC3.33□□□□□ -1.88
CDR1P51861 MIR513C-201ENST00000401352 84 ntBASIC3.33□□□□□ -1.88
CDR1P51861 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
CDR1P51861 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.33□□□□□ -1.88
CDR1P51861 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.33□□□□□ -1.88
CDR1P51861 AC074290.1-201ENST00000448883 135 ntBASIC3.33□□□□□ -1.88
CDR1P51861 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
CDR1P51861 AC103975.1-201ENST00000482506 483 ntBASIC3.33□□□□□ -1.88
CDR1P51861 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
CDR1P51861 RNU6-919P-201ENST00000516731 104 ntBASIC3.33□□□□□ -1.88
CDR1P51861 AC006199.1-201ENST00000548728 219 ntBASIC3.33□□□□□ -1.88
CDR1P51861 MIR4325-201ENST00000583049 90 ntBASIC3.33□□□□□ -1.88
CDR1P51861 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
CDR1P51861 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
CDR1P51861 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.33□□□□□ -1.88
CDR1P51861 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
CDR1P51861 AC068700.1-201ENST00000565862 3754 ntBASIC3.33□□□□□ -1.88
CDR1P51861 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDR1P51861 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDR1P51861 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDR1P51861 AC092435.3-201ENST00000565538 3654 ntBASIC3.32□□□□□ -1.88
CDR1P51861 Y_RNA.415-201ENST00000384012 112 ntBASIC3.32□□□□□ -1.88
CDR1P51861 MIR626-201ENST00000385032 94 ntBASIC3.32□□□□□ -1.88
CDR1P51861 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
CDR1P51861 CYCSP48-201ENST00000417124 323 ntBASIC3.32□□□□□ -1.88
CDR1P51861 AIG1P1-201ENST00000503376 148 ntBASIC3.32□□□□□ -1.88
CDR1P51861 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
CDR1P51861 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.32□□□□□ -1.88
CDR1P51861 EIF4BP1-201ENST00000554881 351 ntBASIC3.32□□□□□ -1.88
CDR1P51861 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.32□□□□□ -1.88
CDR1P51861 MIR3658-201ENST00000636291 56 ntBASIC3.32□□□□□ -1.88
CDR1P51861 AC010329.5-201ENST00000623497 2174 ntBASIC3.32□□□□□ -1.88
CDR1P51861 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDR1P51861 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDR1P51861 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDR1P51861 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
CDR1P51861 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDR1P51861 Y_RNA.287-201ENST00000364853 94 ntBASIC3.31□□□□□ -1.88
CDR1P51861 MIR539-201ENST00000365690 78 ntBASIC3.31□□□□□ -1.88
CDR1P51861 SNORA8.3-201ENST00000384679 139 ntBASIC3.31□□□□□ -1.88
CDR1P51861 CBX3P9-201ENST00000402326 552 ntBASIC3.31□□□□□ -1.88
CDR1P51861 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
CDR1P51861 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.31□□□□□ -1.88
CDR1P51861 RNU6-56P-201ENST00000516986 93 ntBASIC3.31□□□□□ -1.88
CDR1P51861 MIR3923-201ENST00000579521 83 ntBASIC3.31□□□□□ -1.88
CDR1P51861 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDR1P51861 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDR1P51861 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDR1P51861 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDR1P51861 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDR1P51861 SNORD115-30-201ENST00000364117 82 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
CDR1P51861 SNORA72.4-201ENST00000384174 132 ntBASIC3.3□□□□□ -1.88
CDR1P51861 SNORA20-201ENST00000384662 132 ntBASIC3.3□□□□□ -1.88
CDR1P51861 AL031003.1-201ENST00000404229 172 ntBASIC3.3□□□□□ -1.88
CDR1P51861 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.3□□□□□ -1.88
CDR1P51861 S100A11P2-201ENST00000467589 312 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RN7SL499P-201ENST00000481141 276 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RNU5F-2P-201ENST00000516066 82 ntBASIC3.3□□□□□ -1.88
CDR1P51861 RNU6-107P-201ENST00000516643 102 ntBASIC3.3□□□□□ -1.88
CDR1P51861 AC109810.1-201ENST00000534066 224 ntBASIC3.3□□□□□ -1.88
CDR1P51861 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.3□□□□□ -1.88
CDR1P51861 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
CDR1P51861 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDR1P51861 AC134026.1-201ENST00000623249 2239 ntBASIC3.29□□□□□ -1.88
CDR1P51861 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDR1P51861 Y_RNA.172-201ENST00000363765 102 ntBASIC3.29□□□□□ -1.88
CDR1P51861 Y_RNA.337-201ENST00000365312 102 ntBASIC3.29□□□□□ -1.88
CDR1P51861 AL355497.1-201ENST00000406262 551 ntBASIC3.29□□□□□ -1.88
CDR1P51861 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
CDR1P51861 AC022018.1-201ENST00000430685 241 ntBASIC3.29□□□□□ -1.88
CDR1P51861 RPL23AP58-201ENST00000440453 469 ntBASIC3.29□□□□□ -1.88
CDR1P51861 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CDR1P51861 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
CDR1P51861 RNU6-1211P-201ENST00000459179 105 ntBASIC3.29□□□□□ -1.88
CDR1P51861 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
CDR1P51861 RNU6-1234P-201ENST00000516877 103 ntBASIC3.29□□□□□ -1.88
CDR1P51861 LARP7P3-201ENST00000579888 337 ntBASIC3.29□□□□□ -1.88
CDR1P51861 AC008873.1-201ENST00000625051 138 ntBASIC3.29□□□□□ -1.88
CDR1P51861 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDR1P51861 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDR1P51861 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms