Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC010205.1-201ENST00000616668 449 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLCN3P51790 BX322639.1-202ENST00000423987 2213 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCN3P51790 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCN3P51790 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLCN3P51790 AL356292.1-201ENST00000283110 373 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RNU1-76P-201ENST00000362903 159 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 Y_RNA.424-201ENST00000384063 103 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 Y_RNA.526-201ENST00000384572 110 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 MIR320B2-201ENST00000408479 138 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 SRIP3-201ENST00000413200 219 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 AL591806.2-201ENST00000433122 173 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RPEP5-201ENST00000441137 268 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RNU6-1114P-201ENST00000516022 107 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RNU6-1012P-201ENST00000516606 109 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RNA5SP137-201ENST00000516833 135 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 RNU1-104P-201ENST00000517280 175 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 AC131281.1-201ENST00000522984 164 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCN3P51790 MIR4503-201ENST00000582187 83 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
CLCN3P51790 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCN3P51790 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCN3P51790 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLCN3P51790 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CLCN3P51790 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCN3P51790 AC092881.1-201ENST00000638218 2733 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 Y_RNA.214-201ENST00000364201 112 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 RNU4-50P-201ENST00000364361 141 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 Y_RNA.319-201ENST00000365138 92 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 RNU6-245P-201ENST00000384020 107 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 RNU6-281P-201ENST00000384212 103 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 Y_RNA.458-201ENST00000384240 102 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 Y_RNA.518-201ENST00000384552 113 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 Y_RNA.574-201ENST00000384766 95 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AL357139.1-201ENST00000407792 426 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AC114482.1-201ENST00000418010 247 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 SDAD1P3-201ENST00000427380 333 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCN3P51790 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCN3P51790 MTCO3P8-201ENST00000453691 755 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCN3P51790 MRPS35P2-201ENST00000508242 191 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AC025465.3-201ENST00000510570 311 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AC067942.3-201ENST00000512025 362 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCN3P51790 AC090517.1-201ENST00000569307 266 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 SNRPGP20-201ENST00000604477 205 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 7SK.10-201ENST00000621414 298 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 U6.92-201ENST00000636464 89 ntBASIC2.25□□□□□ -2.05
CLCN3P51790 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCN3P51790 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLCN3P51790 Y_RNA.47-201ENST00000362697 108 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 RNU5F-3P-201ENST00000363767 117 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 Y_RNA.452-201ENST00000384202 108 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 ELOCP20-201ENST00000422460 345 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AC027124.2-201ENST00000428249 105 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 USP9YP16-201ENST00000430287 407 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCN3P51790 USP9YP23-201ENST00000455085 407 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AL139109.1-201ENST00000455491 297 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCN3P51790 AC008269.2-201ENST00000561915 1105 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 MYL12BP1-201ENST00000569826 507 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AP000942.4-201ENST00000604811 241 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AL121655.1-201ENST00000605811 308 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 TCL6_2.1-201ENST00000615162 119 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 AC005562.2-201ENST00000618264 111 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
CLCN3P51790 MIR1248-201ENST00000629190 106 ntBASIC2.24□□□□□ -2.05
CLCN3P51790 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CLCN3P51790 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 Y_RNA.149-201ENST00000363558 117 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 Y_RNA.193-201ENST00000363979 102 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 RNU6-574P-201ENST00000384265 107 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 SNORA51.11-201ENST00000384442 131 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 SNORA40.19-201ENST00000390846 128 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.23□□□□□ -2.05
CLCN3P51790 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.23□□□□□ -2.05
CLCN3P51790 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 AL161670.1-201ENST00000554348 137 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.23□□□□□ -2.05
CLCN3P51790 UBL5P4-201ENST00000562584 236 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 AL390123.1-201ENST00000603216 237 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
CLCN3P51790 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms