Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU11-2P-201ENST00000516898 142 ntBASIC-0.22□□□□□ -2.44
SRP9P49458 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.22□□□□□ -2.44
SRP9P49458 AC104408.1-201ENST00000605241 170 ntBASIC-0.22□□□□□ -2.44
SRP9P49458 SNORA25.18-201ENST00000607153 114 ntBASIC-0.22□□□□□ -2.44
SRP9P49458 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.23□□□□□ -2.45
SRP9P49458 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.23□□□□□ -2.45
SRP9P49458 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.23□□□□□ -2.45
SRP9P49458 ELOCP24-201ENST00000456370 334 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 RNU6-863P-201ENST00000515989 104 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 RN7SKP164-201ENST00000516138 266 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 RNA5SP454-201ENST00000517231 127 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.23□□□□□ -2.45
SRP9P49458 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.23□□□□□ -2.45
SRP9P49458 MIR3612-201ENST00000579753 87 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 AC112187.2-201ENST00000604345 283 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 AC080013.3-201ENST00000606839 578 ntBASIC-0.23□□□□□ -2.45
SRP9P49458 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 SNORD113.3-201ENST00000364630 78 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.24□□□□□ -2.45
SRP9P49458 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.24□□□□□ -2.45
SRP9P49458 RNU1-117P-201ENST00000517041 158 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.24□□□□□ -2.45
SRP9P49458 AP003181.2-201ENST00000528941 181 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 MIR4290-201ENST00000583807 95 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 AL121992.2-201ENST00000606262 256 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.24□□□□□ -2.45
SRP9P49458 AC091948.2-201ENST00000636510 279 ntBASIC-0.24□□□□□ -2.45
SRP9P49458 RNU6-654P-201ENST00000364373 107 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 SNORD115-7-201ENST00000365306 82 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.25□□□□□ -2.45
SRP9P49458 SNORA67.2-201ENST00000384300 149 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 MIR520G-201ENST00000385064 90 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 MIR520H-201ENST00000385126 88 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RNU6-387P-201ENST00000411331 105 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 ELOCP4-201ENST00000420090 333 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 MTATP6P16-201ENST00000434543 526 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 MTND3P1-201ENST00000441336 220 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RPL23AP54-201ENST00000495129 419 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RNU7-41P-201ENST00000515917 61 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RPL23AP91-201ENST00000569211 455 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 BNIP3P40-201ENST00000596017 556 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 AL592221.1-201ENST00000605266 382 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 RNU6-489P-201ENST00000618289 107 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 AC067863.3-201ENST00000624172 122 ntBASIC-0.25□□□□□ -2.45
SRP9P49458 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.26□□□□□ -2.45
SRP9P49458 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 RNU6V-201ENST00000384105 107 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 SNORA2B-201ENST00000384583 137 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 RNA5SP95-201ENST00000410319 137 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.26□□□□□ -2.45
SRP9P49458 AL353997.1-201ENST00000432936 108 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 SEPT7P4-201ENST00000437076 306 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.26□□□□□ -2.45
SRP9P49458 RNU6-323P-201ENST00000521915 107 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.26□□□□□ -2.45
SRP9P49458 FRG2DP-202ENST00000566967 323 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 AC104695.3-201ENST00000604052 296 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 AL008636.1-201ENST00000625038 1018 ntBASIC-0.26□□□□□ -2.45
SRP9P49458 MIRLET7C-201ENST00000362160 84 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 RNU6-550P-201ENST00000391057 101 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 MTCO2P23-201ENST00000425216 680 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.27□□□□□ -2.45
SRP9P49458 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.27□□□□□ -2.45
SRP9P49458 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 BTBD7P2-201ENST00000441962 620 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 HMGN2P26-201ENST00000463169 339 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 MTCO2P29-201ENST00000465212 189 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.27□□□□□ -2.45
SRP9P49458 RNU2-56P-201ENST00000516826 190 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 RNU6-58P-201ENST00000517143 103 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 MTND4LP18-201ENST00000526864 291 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 AC027288.2-201ENST00000553028 243 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 AC112693.2-201ENST00000556538 232 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 MIR3678-201ENST00000578455 94 ntBASIC-0.27□□□□□ -2.45
SRP9P49458 RPL37P21-201ENST00000435890 276 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.28□□□□□ -2.45
SRP9P49458 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.28□□□□□ -2.45
SRP9P49458 AC116562.3-201ENST00000506136 177 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 RNU6-276P-201ENST00000516114 96 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.28□□□□□ -2.45
SRP9P49458 AC068587.5-201ENST00000528506 175 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.28□□□□□ -2.45
SRP9P49458 AC068790.2-201ENST00000602601 557 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 AC090517.2-201ENST00000614966 680 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 AC008873.1-201ENST00000625051 138 ntBASIC-0.28□□□□□ -2.45
SRP9P49458 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
SRP9P49458 RNU6-137P-201ENST00000363680 108 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 SNORA32.1-201ENST00000364514 115 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.29□□□□□ -2.46
SRP9P49458 AL139396.1-201ENST00000421137 167 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 HSFY5P-201ENST00000453726 309 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 MTCO2P6-201ENST00000463134 685 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.29□□□□□ -2.46
SRP9P49458 AC010493.1-201ENST00000513479 292 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms