Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.88□□□□□ -2.11
NKX2-1P43699 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
NKX2-1P43699 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
NKX2-1P43699 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NKX2-1P43699 RNY3P11-201ENST00000364153 102 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 RNU6-879P-201ENST00000364328 108 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 Y_RNA.230-201ENST00000364348 109 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 Y_RNA.424-201ENST00000384063 103 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 SNORD63-201ENST00000384262 68 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 RNU6-975P-201ENST00000384296 105 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 Y_RNA.485-201ENST00000384395 102 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 MIR628-201ENST00000385229 95 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 SNORD12B-201ENST00000410433 91 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 RNU6-1001P-201ENST00000411265 100 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.87□□□□□ -2.11
NKX2-1P43699 AC010095.1-201ENST00000443543 144 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
NKX2-1P43699 AC074290.1-201ENST00000448883 135 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.87□□□□□ -2.11
NKX2-1P43699 U8.20-201ENST00000459445 131 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 HMGN2P9-201ENST00000476875 229 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC010469.2-201ENST00000496412 480 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.87□□□□□ -2.11
NKX2-1P43699 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.87□□□□□ -2.11
NKX2-1P43699 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 RNU6-1137P-201ENST00000517073 99 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AK6P2-201ENST00000549020 471 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 HSBP1P1-201ENST00000555205 166 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC025754.2-201ENST00000606491 432 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC240442.1-201ENST00000616055 283 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AL162373.1-201ENST00000620433 407 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.87□□□□□ -2.11
NKX2-1P43699 AC016717.2-201ENST00000609089 5141 ntBASIC1.87□□□□□ -2.11
NKX2-1P43699 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
NKX2-1P43699 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
NKX2-1P43699 AC062016.1-201ENST00000355719 319 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 SNORD114-7-201ENST00000362520 77 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 SNORA5B-201ENST00000363786 132 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNU6-1310P-201ENST00000384153 107 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNU6-301P-201ENST00000384277 107 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 Y_RNA.471-201ENST00000384312 102 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 MIR606-201ENST00000384851 96 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNU6-101P-201ENST00000410323 104 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 AC096644.2-201ENST00000429278 159 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RPS15AP28-201ENST00000435088 386 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 AL109933.2-201ENST00000452651 260 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 RNU7-169P-201ENST00000459456 61 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 Y_RNA.715-201ENST00000517082 110 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 AC113195.1-201ENST00000579952 141 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 MIR4753-201ENST00000585119 83 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.86□□□□□ -2.11
NKX2-1P43699 AL390123.1-201ENST00000603216 237 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.86□□□□□ -2.11
NKX2-1P43699 MIR6766-201ENST00000622641 72 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 U6.92-201ENST00000636464 89 ntBASIC1.86□□□□□ -2.11
NKX2-1P43699 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NKX2-1P43699 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NKX2-1P43699 ZNF658B-202ENST00000615961 3375 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NKX2-1P43699 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 RNA5SP361-201ENST00000362686 118 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 RNU6-1235P-201ENST00000384559 107 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NKX2-1P43699 MIR1185-2-201ENST00000408687 86 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 TOMM22P2-201ENST00000430735 237 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.85□□□□□ -2.11
NKX2-1P43699 RNU6-498P-201ENST00000459468 107 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
NKX2-1P43699 SNORA40.9-201ENST00000515895 93 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 RNU6-764P-201ENST00000516396 105 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 RNA5SP24-201ENST00000516478 95 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
NKX2-1P43699 Y_RNA.772-201ENST00000606692 102 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
NKX2-1P43699 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX2-1P43699 Y_RNA.183-201ENST00000363882 113 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RNA5SP493-201ENST00000364115 91 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 MIR518C-201ENST00000384822 101 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 NDUFB4P4-201ENST00000404822 243 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-1P43699 AL390729.2-201ENST00000416137 156 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 BX510359.4-201ENST00000423750 193 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms