Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA4P43681 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CHRNA4P43681 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.67□□□□□ -1.82
CHRNA4P43681 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 Y_RNA.111-201ENST00000363248 100 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 SNORD46.1-201ENST00000364139 104 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 SNORA7.2-201ENST00000364446 145 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 RNU6-497P-201ENST00000365316 104 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 MIR1185-2-201ENST00000408687 86 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 AC023449.1-201ENST00000454464 154 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 SNORD11-201ENST00000459124 84 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 RPS27AP10-201ENST00000496103 208 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 AC005921.1-201ENST00000510589 286 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 AC091826.1-201ENST00000514065 313 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 SNORA31.8-201ENST00000516327 108 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.67□□□□□ -1.82
CHRNA4P43681 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
CHRNA4P43681 MIR4662B-201ENST00000579498 81 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 AL121772.2-201ENST00000614331 297 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 IGLL4P-201ENST00000614590 133 ntBASIC3.67□□□□□ -1.82
CHRNA4P43681 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
CHRNA4P43681 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CHRNA4P43681 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.67□□□□□ -1.82
CHRNA4P43681 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
CHRNA4P43681 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CHRNA4P43681 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHRNA4P43681 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CHRNA4P43681 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.66□□□□□ -1.82
CHRNA4P43681 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CHRNA4P43681 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA4P43681 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA4P43681 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA4P43681 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.82
CHRNA4P43681 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA4P43681 SNORA27.1-201ENST00000362604 124 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 RNU6-271P-201ENST00000363858 105 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 RNU6-884P-201ENST00000363889 107 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 Y_RNA.213-201ENST00000364178 111 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 RNA5SP387-201ENST00000364226 106 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 HMGN2P20-201ENST00000437531 273 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 HMGN2P10-201ENST00000448085 265 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 AC011406.1-201ENST00000512440 370 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 RNU2-13P-201ENST00000515909 113 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 ACA59.2-201ENST00000517061 156 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 AC107294.3-201ENST00000609211 526 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
CHRNA4P43681 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
CHRNA4P43681 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CHRNA4P43681 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHRNA4P43681 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA4P43681 MAPK10-372ENST00000641954 3413 ntBASIC3.65□□□□□ -1.82
CHRNA4P43681 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHRNA4P43681 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.65□□□□□ -1.83
CHRNA4P43681 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 Y_RNA.290-201ENST00000364879 114 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 Y_RNA.333-201ENST00000365274 102 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 RNU6-1138P-201ENST00000365359 106 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 SNORD6-201ENST00000365444 73 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 SNORA11.2-201ENST00000408318 127 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 RNU6ATAC-201ENST00000408749 126 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 CRYBB2P1-203ENST00000415709 538 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.65□□□□□ -1.83
CHRNA4P43681 MIR2114-201ENST00000516645 80 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 SNORA70.18-201ENST00000516696 98 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 MIR3129-201ENST00000581095 76 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 MIR2681-201ENST00000581814 105 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 USP8P1-201ENST00000494673 3183 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 AC103988.1-201ENST00000566382 2177 ntBASIC3.65□□□□□ -1.83
CHRNA4P43681 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CHRNA4P43681 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA4P43681 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA4P43681 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHRNA4P43681 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHRNA4P43681 AL356292.1-201ENST00000283110 373 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 RNU4-15P-201ENST00000362613 141 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 Y_RNA.73-201ENST00000362910 113 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 RNU6-414P-201ENST00000363705 104 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 RNU6-1292P-201ENST00000383856 107 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 MIR586-201ENST00000385035 97 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 AL117342.1-201ENST00000404861 406 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 RNU2-37P-201ENST00000410695 177 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 snoU13.4-201ENST00000458916 104 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 AC084357.1-201ENST00000473404 255 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 RNU6-830P-201ENST00000516353 107 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA4P43681 RPL23AP91-201ENST00000569211 455 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 AC112200.1-201ENST00000625015 234 ntBASIC3.64□□□□□ -1.83
CHRNA4P43681 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.64□□□□□ -1.83
CHRNA4P43681 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA4P43681 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.64□□□□□ -1.83
CHRNA4P43681 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms