Protein–RNA interactions for Protein: P38935

IGHMBP2, DNA-binding protein SMUBP-2, humanhuman

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHMBP2P38935 AC008121.3-201ENST00000618726 433 ntBASIC2.56□□□□□ -2
IGHMBP2P38935 U2.6-201ENST00000619225 191 ntBASIC2.56□□□□□ -2
IGHMBP2P38935 U2.5-201ENST00000619465 191 ntBASIC2.56□□□□□ -2
IGHMBP2P38935 U2.10-201ENST00000620268 191 ntBASIC2.56□□□□□ -2
IGHMBP2P38935 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.55□□□□□ -2
IGHMBP2P38935 Y_RNA.152-201ENST00000363578 100 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
IGHMBP2P38935 RNU2-25P-201ENST00000411041 191 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 RNU6-130P-201ENST00000411112 103 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 CBX3P6-201ENST00000430257 527 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.55□□□□□ -2
IGHMBP2P38935 AC073910.1-201ENST00000445047 438 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 FCF1P4-201ENST00000448326 183 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC091179.3-201ENST00000474761 144 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 CKS1BP2-201ENST00000497342 240 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC067942.3-201ENST00000512025 362 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 RNU6-397P-201ENST00000516226 104 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 RNU2-44P-201ENST00000516795 194 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.55□□□□□ -2
IGHMBP2P38935 AC008269.2-201ENST00000561915 1105 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 MIR5006-201ENST00000583027 110 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 Y_RNA.783-201ENST00000613546 102 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC011476.5-201ENST00000615594 130 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 AC240442.1-201ENST00000616055 283 ntBASIC2.55□□□□□ -2
IGHMBP2P38935 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.54□□□□□ -2
IGHMBP2P38935 MIRLET7G-201ENST00000362280 84 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-26P-201ENST00000383985 107 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-926P-201ENST00000384075 107 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-793P-201ENST00000384233 104 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 MIR1294-201ENST00000408503 142 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.54□□□□□ -2
IGHMBP2P38935 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.54□□□□□ -2
IGHMBP2P38935 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.54□□□□□ -2
IGHMBP2P38935 CYP2C59P-201ENST00000457790 269 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
IGHMBP2P38935 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
IGHMBP2P38935 MIR449C-201ENST00000516047 92 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 Y_RNA.683-201ENST00000516508 93 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RNU6-635P-201ENST00000516651 102 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 AC018630.3-201ENST00000542637 96 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 AC010205.1-201ENST00000616668 449 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 AC135776.4-201ENST00000624300 1904 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 MTND5P35-201ENST00000557537 1720 ntBASIC2.54□□□□□ -2
IGHMBP2P38935 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.53□□□□□ -2
IGHMBP2P38935 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
IGHMBP2P38935 ZNF355P-201ENST00000427301 3216 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 RNU1-62P-201ENST00000362599 164 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 Y_RNA.595-201ENST00000410403 105 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 AL139156.1-201ENST00000412785 841 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
IGHMBP2P38935 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 AC009237.7-201ENST00000447357 229 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 AC007395.1-201ENST00000451333 677 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 RNU6-897P-201ENST00000517135 105 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
IGHMBP2P38935 RPL17P51-201ENST00000605218 238 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
IGHMBP2P38935 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IGHMBP2P38935 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
IGHMBP2P38935 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU1-23P-201ENST00000363361 144 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU6-727P-201ENST00000363592 107 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 Y_RNA.214-201ENST00000364201 112 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 Y_RNA.276-201ENST00000364732 109 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU6-1109P-201ENST00000391187 107 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RPL21P1-201ENST00000399532 476 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 AL033519.2-201ENST00000403958 392 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 MRPL35P1-201ENST00000404272 572 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU2-63P-201ENST00000410792 194 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.52□□□□□ -2.01
IGHMBP2P38935 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU6-344P-201ENST00000516635 111 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU6-1098P-201ENST00000516772 96 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 SNORA48.11-201ENST00000517015 89 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 RRN3P3-201ENST00000549207 578 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 PRR13P7-201ENST00000605538 430 ntBASIC2.52□□□□□ -2.01
IGHMBP2P38935 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
IGHMBP2P38935 Y_RNA.47-201ENST00000362697 108 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 Y_RNA.439-201ENST00000384119 94 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 RNU6-611P-201ENST00000384276 104 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 AC019129.1-201ENST00000403786 261 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 ELOCP20-201ENST00000422460 345 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
IGHMBP2P38935 PCNPP5-201ENST00000452246 481 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 RPL26P26-201ENST00000480251 434 ntBASIC2.51□□□□□ -2.01
IGHMBP2P38935 RPS23P5-201ENST00000495419 428 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms