Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-57P-201ENST00000411348 103 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU7-57P-201ENST00000459540 60 ntBASIC1.17□□□□□ -2.22
RORAP35398 MTCO2P30-201ENST00000503662 364 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU6-344P-201ENST00000516635 111 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
RORAP35398 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.17□□□□□ -2.22
RORAP35398 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.17□□□□□ -2.22
RORAP35398 AL078604.3-201ENST00000615580 211 ntBASIC1.17□□□□□ -2.22
RORAP35398 AC137590.2-201ENST00000619709 240 ntBASIC1.17□□□□□ -2.22
RORAP35398 U6.108-201ENST00000637764 58 ntBASIC1.17□□□□□ -2.22
RORAP35398 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
RORAP35398 MTND5P35-201ENST00000557537 1720 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU1-22P-201ENST00000363334 158 ntBASIC1.16□□□□□ -2.22
RORAP35398 RNU6-1065P-201ENST00000384513 106 ntBASIC1.16□□□□□ -2.22
RORAP35398 RNU6-417P-201ENST00000384712 107 ntBASIC1.16□□□□□ -2.22
RORAP35398 MIR515-2-201ENST00000384883 83 ntBASIC1.16□□□□□ -2.22
RORAP35398 MIR515-1-201ENST00000384884 83 ntBASIC1.16□□□□□ -2.22
RORAP35398 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RORAP35398 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
RORAP35398 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
RORAP35398 AL590002.1-201ENST00000406554 418 ntBASIC1.16□□□□□ -2.22
RORAP35398 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.16□□□□□ -2.22
RORAP35398 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.16□□□□□ -2.22
RORAP35398 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
RORAP35398 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
RORAP35398 AC093534.1-201ENST00000504977 132 ntBASIC1.16□□□□□ -2.22
RORAP35398 RNU6-1146P-201ENST00000516282 102 ntBASIC1.16□□□□□ -2.22
RORAP35398 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
RORAP35398 RAB11AP2-201ENST00000545905 639 ntBASIC1.16□□□□□ -2.22
RORAP35398 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.16□□□□□ -2.22
RORAP35398 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
RORAP35398 AC024614.3-201ENST00000637860 256 ntBASIC1.16□□□□□ -2.22
RORAP35398 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
RORAP35398 Y_RNA.517-201ENST00000384551 106 ntBASIC1.15□□□□□ -2.23
RORAP35398 MRPL35P1-201ENST00000404272 572 ntBASIC1.15□□□□□ -2.23
RORAP35398 COX6CP10-201ENST00000416832 224 ntBASIC1.15□□□□□ -2.23
RORAP35398 RPS27P1-201ENST00000450552 247 ntBASIC1.15□□□□□ -2.23
RORAP35398 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.15□□□□□ -2.23
RORAP35398 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.15□□□□□ -2.23
RORAP35398 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.15□□□□□ -2.23
RORAP35398 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
RORAP35398 RNU6-506P-201ENST00000516553 94 ntBASIC1.15□□□□□ -2.23
RORAP35398 RNU6-256P-201ENST00000516747 97 ntBASIC1.15□□□□□ -2.23
RORAP35398 RNU1-117P-201ENST00000517041 158 ntBASIC1.15□□□□□ -2.23
RORAP35398 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
RORAP35398 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.15□□□□□ -2.23
RORAP35398 AC027288.2-201ENST00000553028 243 ntBASIC1.15□□□□□ -2.23
RORAP35398 TPRKBP2-201ENST00000565969 475 ntBASIC1.15□□□□□ -2.23
RORAP35398 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.15□□□□□ -2.23
RORAP35398 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
RORAP35398 SNORD115-32-201ENST00000364079 82 ntBASIC1.14□□□□□ -2.23
RORAP35398 Y_RNA.212-201ENST00000364177 102 ntBASIC1.14□□□□□ -2.23
RORAP35398 RNU6-790P-201ENST00000384479 105 ntBASIC1.14□□□□□ -2.23
RORAP35398 Y_RNA.530-201ENST00000384587 101 ntBASIC1.14□□□□□ -2.23
RORAP35398 MIR32-201ENST00000384965 70 ntBASIC1.14□□□□□ -2.23
RORAP35398 MIR517A-201ENST00000385001 87 ntBASIC1.14□□□□□ -2.23
RORAP35398 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RORAP35398 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RORAP35398 RNU6-1148P-201ENST00000410992 104 ntBASIC1.14□□□□□ -2.23
RORAP35398 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
RORAP35398 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.14□□□□□ -2.23
RORAP35398 AL445305.1-201ENST00000432577 575 ntBASIC1.14□□□□□ -2.23
RORAP35398 AL353572.1-201ENST00000442490 417 ntBASIC1.14□□□□□ -2.23
RORAP35398 PCMTD1P1-201ENST00000455560 355 ntBASIC1.14□□□□□ -2.23
RORAP35398 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.14□□□□□ -2.23
RORAP35398 RNU6-221P-201ENST00000459541 99 ntBASIC1.14□□□□□ -2.23
RORAP35398 RPL30P10-201ENST00000488148 337 ntBASIC1.14□□□□□ -2.23
RORAP35398 RNU6-58P-201ENST00000517143 103 ntBASIC1.14□□□□□ -2.23
RORAP35398 AL442163.3-201ENST00000554110 156 ntBASIC1.14□□□□□ -2.23
RORAP35398 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.14□□□□□ -2.23
RORAP35398 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.14□□□□□ -2.23
RORAP35398 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
RORAP35398 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
RORAP35398 MIR3942-201ENST00000585264 109 ntBASIC1.14□□□□□ -2.23
RORAP35398 AC080078.3-201ENST00000605407 463 ntBASIC1.14□□□□□ -2.23
RORAP35398 AC097065.2-201ENST00000608159 533 ntBASIC1.14□□□□□ -2.23
RORAP35398 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
RORAP35398 AL078596.1-201ENST00000624856 447 ntBASIC1.14□□□□□ -2.23
RORAP35398 snoZ196.1-201ENST00000625269 89 ntBASIC1.14□□□□□ -2.23
RORAP35398 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.14□□□□□ -2.23
RORAP35398 MTND4P12-201ENST00000498999 1377 ntBASIC1.13□□□□□ -2.23
RORAP35398 RNU4-9P-201ENST00000364951 139 ntBASIC1.13□□□□□ -2.23
RORAP35398 Y_RNA.414-201ENST00000384011 101 ntBASIC1.13□□□□□ -2.23
RORAP35398 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
RORAP35398 MIR1253-201ENST00000408273 105 ntBASIC1.13□□□□□ -2.23
RORAP35398 AC016907.1-201ENST00000419483 435 ntBASIC1.13□□□□□ -2.23
RORAP35398 ZNF885P-201ENST00000420174 1098 ntBASIC1.13□□□□□ -2.23
RORAP35398 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
RORAP35398 DAP3P1-201ENST00000441522 278 ntBASIC1.13□□□□□ -2.23
RORAP35398 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.13□□□□□ -2.23
RORAP35398 AL163195.1-201ENST00000496941 348 ntBASIC1.13□□□□□ -2.23
RORAP35398 TRBVA-201ENST00000498804 316 ntBASIC1.13□□□□□ -2.23
RORAP35398 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.13□□□□□ -2.23
RORAP35398 RNU7-128P-201ENST00000517247 62 ntBASIC1.13□□□□□ -2.23
RORAP35398 AC080013.6-201ENST00000606185 215 ntBASIC1.13□□□□□ -2.23
RORAP35398 AC090617.10-201ENST00000624308 134 ntBASIC1.13□□□□□ -2.23
RORAP35398 SNORD87-201ENST00000364849 89 ntBASIC1.12□□□□□ -2.23
RORAP35398 SNORA12.1-201ENST00000390873 148 ntBASIC1.12□□□□□ -2.23
RORAP35398 RPL21P1-201ENST00000399532 476 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms