Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CIITAP33076 AL079342.1-201ENST00000401460 267 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AL731563.1-201ENST00000442202 214 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.49□□□□□ -2.01
CIITAP33076 LINC01399-202ENST00000458450 244 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AC090515.1-201ENST00000465295 476 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AC140059.1-201ENST00000489238 361 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AC025465.3-201ENST00000510570 311 ntBASIC2.49□□□□□ -2.01
CIITAP33076 SNORA25.14-201ENST00000516481 132 ntBASIC2.49□□□□□ -2.01
CIITAP33076 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
CIITAP33076 SNORA48.11-201ENST00000517015 89 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.49□□□□□ -2.01
CIITAP33076 MZT1P2-201ENST00000604387 248 ntBASIC2.49□□□□□ -2.01
CIITAP33076 AP000942.4-201ENST00000604811 241 ntBASIC2.49□□□□□ -2.01
CIITAP33076 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CIITAP33076 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
CIITAP33076 Y_RNA.152-201ENST00000363578 100 ntBASIC2.48□□□□□ -2.01
CIITAP33076 U3.9-201ENST00000363823 204 ntBASIC2.48□□□□□ -2.01
CIITAP33076 Y_RNA.183-201ENST00000363882 113 ntBASIC2.48□□□□□ -2.01
CIITAP33076 RNU6-944P-201ENST00000364023 107 ntBASIC2.48□□□□□ -2.01
CIITAP33076 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
CIITAP33076 Y_RNA.452-201ENST00000384202 108 ntBASIC2.48□□□□□ -2.01
CIITAP33076 MIR95-201ENST00000385072 81 ntBASIC2.48□□□□□ -2.01
CIITAP33076 SNORD78.2-201ENST00000391076 69 ntBASIC2.48□□□□□ -2.01
CIITAP33076 MRPL35P1-201ENST00000404272 572 ntBASIC2.48□□□□□ -2.01
CIITAP33076 SNORD12B-201ENST00000410433 91 ntBASIC2.48□□□□□ -2.01
CIITAP33076 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
CIITAP33076 AC098869.1-201ENST00000481627 292 ntBASIC2.48□□□□□ -2.01
CIITAP33076 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.48□□□□□ -2.01
CIITAP33076 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.48□□□□□ -2.01
CIITAP33076 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.48□□□□□ -2.01
CIITAP33076 MIR3149-201ENST00000584629 83 ntBASIC2.48□□□□□ -2.01
CIITAP33076 AL670379.2-201ENST00000604983 252 ntBASIC2.48□□□□□ -2.01
CIITAP33076 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.48□□□□□ -2.01
CIITAP33076 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.48□□□□□ -2.01
CIITAP33076 MIR8062-201ENST00000621515 85 ntBASIC2.48□□□□□ -2.01
CIITAP33076 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CIITAP33076 Y_RNA.19-201ENST00000362462 99 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-961P-201ENST00000363893 105 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-280P-201ENST00000364145 104 ntBASIC2.47□□□□□ -2.01
CIITAP33076 Y_RNA.396-201ENST00000383949 103 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-245P-201ENST00000384020 107 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-926P-201ENST00000384075 107 ntBASIC2.47□□□□□ -2.01
CIITAP33076 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-505P-201ENST00000384427 107 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6-1274P-201ENST00000384557 107 ntBASIC2.47□□□□□ -2.01
CIITAP33076 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
CIITAP33076 MIR561-201ENST00000385216 97 ntBASIC2.47□□□□□ -2.01
CIITAP33076 MT-TW-201ENST00000387382 68 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
CIITAP33076 RPL21P38-201ENST00000418090 167 ntBASIC2.47□□□□□ -2.01
CIITAP33076 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.47□□□□□ -2.01
CIITAP33076 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.47□□□□□ -2.01
CIITAP33076 AC091179.3-201ENST00000474761 144 ntBASIC2.47□□□□□ -2.01
CIITAP33076 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.47□□□□□ -2.01
CIITAP33076 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.47□□□□□ -2.01
CIITAP33076 AC010999.1-201ENST00000611856 324 ntBASIC2.47□□□□□ -2.01
CIITAP33076 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
CIITAP33076 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.47□□□□□ -2.01
CIITAP33076 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.47□□□□□ -2.01
CIITAP33076 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CIITAP33076 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CIITAP33076 AC092881.1-201ENST00000638218 2733 ntBASIC2.47□□□□□ -2.01
CIITAP33076 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CIITAP33076 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CIITAP33076 SNORD115-46-201ENST00000390982 71 ntBASIC2.46□□□□□ -2.02
CIITAP33076 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.46□□□□□ -2.02
CIITAP33076 AC027124.2-201ENST00000428249 105 ntBASIC2.46□□□□□ -2.02
CIITAP33076 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
CIITAP33076 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.46□□□□□ -2.02
CIITAP33076 RNY3P15-201ENST00000516297 97 ntBASIC2.46□□□□□ -2.02
CIITAP33076 AK6P2-201ENST00000549020 471 ntBASIC2.46□□□□□ -2.02
CIITAP33076 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
CIITAP33076 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
CIITAP33076 U4.1-201ENST00000620349 87 ntBASIC2.46□□□□□ -2.02
CIITAP33076 AC130454.1-201ENST00000622948 401 ntBASIC2.46□□□□□ -2.02
CIITAP33076 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.46□□□□□ -2.02
CIITAP33076 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CIITAP33076 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CIITAP33076 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CIITAP33076 snoU2_19.2-201ENST00000363024 80 ntBASIC2.45□□□□□ -2.02
CIITAP33076 Y_RNA.143-201ENST00000363520 106 ntBASIC2.45□□□□□ -2.02
CIITAP33076 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
CIITAP33076 SNORA18.2-201ENST00000383865 132 ntBASIC2.45□□□□□ -2.02
CIITAP33076 Y_RNA.439-201ENST00000384119 94 ntBASIC2.45□□□□□ -2.02
CIITAP33076 SNORA67.2-201ENST00000384300 149 ntBASIC2.45□□□□□ -2.02
CIITAP33076 MIR215-201ENST00000384858 110 ntBASIC2.45□□□□□ -2.02
CIITAP33076 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CIITAP33076 RNU2-20P-201ENST00000410425 191 ntBASIC2.45□□□□□ -2.02
CIITAP33076 Y_RNA.597-201ENST00000410463 100 ntBASIC2.45□□□□□ -2.02
CIITAP33076 RNA5SP504-201ENST00000410676 117 ntBASIC2.45□□□□□ -2.02
CIITAP33076 ELOCP21-201ENST00000412558 336 ntBASIC2.45□□□□□ -2.02
CIITAP33076 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
CIITAP33076 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.45□□□□□ -2.02
CIITAP33076 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
CIITAP33076 SNORA40.9-201ENST00000515895 93 ntBASIC2.45□□□□□ -2.02
CIITAP33076 Y_RNA.668-201ENST00000516233 93 ntBASIC2.45□□□□□ -2.02
CIITAP33076 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
CIITAP33076 RNU6-586P-201ENST00000517265 104 ntBASIC2.45□□□□□ -2.02
CIITAP33076 RRN3P3-201ENST00000549207 578 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms