Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HMGN2P3-201ENST00000433603 273 ntBASIC3.86□□□□□ -1.79
RXRBP28702 HMGN2P5-201ENST00000436882 273 ntBASIC3.86□□□□□ -1.79
RXRBP28702 AC107027.2-201ENST00000512197 115 ntBASIC3.86□□□□□ -1.79
RXRBP28702 RNU6-659P-201ENST00000516454 104 ntBASIC3.86□□□□□ -1.79
RXRBP28702 RNU6-453P-201ENST00000516819 85 ntBASIC3.86□□□□□ -1.79
RXRBP28702 AC136628.3-201ENST00000521868 290 ntBASIC3.86□□□□□ -1.79
RXRBP28702 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.86□□□□□ -1.79
RXRBP28702 AC009163.5-201ENST00000575421 637 ntBASIC3.86□□□□□ -1.79
RXRBP28702 MIR4738-201ENST00000579134 87 ntBASIC3.86□□□□□ -1.79
RXRBP28702 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RXRBP28702 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RXRBP28702 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RXRBP28702 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RXRBP28702 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RXRBP28702 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
RXRBP28702 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RXRBP28702 RNU6-103P-201ENST00000363686 107 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RNU6-1048P-201ENST00000364054 107 ntBASIC3.85□□□□□ -1.79
RXRBP28702 MIR539-201ENST00000365690 78 ntBASIC3.85□□□□□ -1.79
RXRBP28702 Y_RNA.563-201ENST00000384707 108 ntBASIC3.85□□□□□ -1.79
RXRBP28702 MIR512-1-201ENST00000384913 84 ntBASIC3.85□□□□□ -1.79
RXRBP28702 MIR513C-201ENST00000401352 84 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RPL23AP58-201ENST00000440453 469 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RPL39P29-201ENST00000447779 157 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RPL37P4-201ENST00000448908 268 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RPL23AP62-201ENST00000463396 453 ntBASIC3.85□□□□□ -1.79
RXRBP28702 RNU6-581P-201ENST00000516214 105 ntBASIC3.85□□□□□ -1.79
RXRBP28702 AC109810.1-201ENST00000534066 224 ntBASIC3.85□□□□□ -1.79
RXRBP28702 AC090897.2-201ENST00000581715 130 ntBASIC3.85□□□□□ -1.79
RXRBP28702 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RXRBP28702 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
RXRBP28702 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
RXRBP28702 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RXRBP28702 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
RXRBP28702 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RXRBP28702 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RXRBP28702 RNU6-834P-201ENST00000362367 110 ntBASIC3.84□□□□□ -1.79
RXRBP28702 RNU1-62P-201ENST00000362599 164 ntBASIC3.84□□□□□ -1.79
RXRBP28702 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
RXRBP28702 AC090525.1-201ENST00000479116 478 ntBASIC3.84□□□□□ -1.79
RXRBP28702 RPS29P20-201ENST00000489592 171 ntBASIC3.84□□□□□ -1.79
RXRBP28702 AC027176.1-201ENST00000560204 514 ntBASIC3.84□□□□□ -1.79
RXRBP28702 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
RXRBP28702 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RXRBP28702 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RXRBP28702 AC134026.1-201ENST00000623249 2239 ntBASIC3.84□□□□□ -1.79
RXRBP28702 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RXRBP28702 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RXRBP28702 AC073325.2-201ENST00000339545 159 ntBASIC3.83□□□□□ -1.8
RXRBP28702 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RXRBP28702 RNY1P11-201ENST00000363759 113 ntBASIC3.83□□□□□ -1.8
RXRBP28702 Y_RNA.508-201ENST00000384502 114 ntBASIC3.83□□□□□ -1.8
RXRBP28702 RNU6-429P-201ENST00000384582 108 ntBASIC3.83□□□□□ -1.8
RXRBP28702 RNA5SP475-201ENST00000410568 110 ntBASIC3.83□□□□□ -1.8
RXRBP28702 AC019205.3-201ENST00000424573 156 ntBASIC3.83□□□□□ -1.8
RXRBP28702 RPL23AP82-202ENST00000427528 469 ntBASIC3.83□□□□□ -1.8
RXRBP28702 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.83□□□□□ -1.8
RXRBP28702 HMGN2P16-201ENST00000456802 261 ntBASIC3.83□□□□□ -1.8
RXRBP28702 CENPBD1P1-201ENST00000464061 469 ntBASIC3.83□□□□□ -1.8
RXRBP28702 RPL23AP70-201ENST00000483361 460 ntBASIC3.83□□□□□ -1.8
RXRBP28702 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.83□□□□□ -1.8
RXRBP28702 AL356575.1-201ENST00000603008 283 ntBASIC3.83□□□□□ -1.8
RXRBP28702 AC046143.2-201ENST00000609789 160 ntBASIC3.83□□□□□ -1.8
RXRBP28702 AC005520.5-201ENST00000613926 164 ntBASIC3.83□□□□□ -1.8
RXRBP28702 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.83□□□□□ -1.8
RXRBP28702 AC012640.5-201ENST00000623897 319 ntBASIC3.83□□□□□ -1.8
RXRBP28702 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RXRBP28702 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
RXRBP28702 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RXRBP28702 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RXRBP28702 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RXRBP28702 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RXRBP28702 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RXRBP28702 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RXRBP28702 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RXRBP28702 AF117829.1-206ENST00000621883 3802 ntBASIC3.82□□□□□ -1.8
RXRBP28702 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.82□□□□□ -1.8
RXRBP28702 AC010329.5-201ENST00000623497 2174 ntBASIC3.82□□□□□ -1.8
RXRBP28702 SNORA63.4-201ENST00000362763 126 ntBASIC3.82□□□□□ -1.8
RXRBP28702 SNORD115-30-201ENST00000364117 82 ntBASIC3.82□□□□□ -1.8
RXRBP28702 RNU1-112P-201ENST00000364401 164 ntBASIC3.82□□□□□ -1.8
RXRBP28702 Y_RNA.415-201ENST00000384012 112 ntBASIC3.82□□□□□ -1.8
RXRBP28702 RNU6-376P-201ENST00000384731 106 ntBASIC3.82□□□□□ -1.8
RXRBP28702 AC004866.1-201ENST00000411748 78 ntBASIC3.82□□□□□ -1.8
RXRBP28702 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.82□□□□□ -1.8
RXRBP28702 RPL26P9-201ENST00000457466 433 ntBASIC3.82□□□□□ -1.8
RXRBP28702 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.82□□□□□ -1.8
RXRBP28702 AC092991.1-201ENST00000477176 376 ntBASIC3.82□□□□□ -1.8
RXRBP28702 PDCD5P2-201ENST00000507570 312 ntBASIC3.82□□□□□ -1.8
RXRBP28702 AL391813.1-201ENST00000603098 260 ntBASIC3.82□□□□□ -1.8
RXRBP28702 CTSLP2-204ENST00000629029 392 ntBASIC3.82□□□□□ -1.8
RXRBP28702 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
RXRBP28702 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RXRBP28702 RNU6-1280P-201ENST00000365211 107 ntBASIC3.81□□□□□ -1.8
RXRBP28702 SNORA9.2-201ENST00000365361 133 ntBASIC3.81□□□□□ -1.8
RXRBP28702 SNORA72.4-201ENST00000384174 132 ntBASIC3.81□□□□□ -1.8
RXRBP28702 RNY4P18-201ENST00000391107 89 ntBASIC3.81□□□□□ -1.8
RXRBP28702 AL138827.1-201ENST00000402666 306 ntBASIC3.81□□□□□ -1.8
RXRBP28702 RNA5SP390-201ENST00000410191 113 ntBASIC3.81□□□□□ -1.8
RXRBP28702 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms