Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Y_RNA.626-201ENST00000411288 95 ntBASIC2.76□□□□□ -1.97
CD40P25942 AC016909.1-201ENST00000415916 166 ntBASIC2.76□□□□□ -1.97
CD40P25942 AC008134.1-201ENST00000420943 193 ntBASIC2.76□□□□□ -1.97
CD40P25942 AL357134.1-201ENST00000445848 426 ntBASIC2.76□□□□□ -1.97
CD40P25942 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.76□□□□□ -1.97
CD40P25942 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.76□□□□□ -1.97
CD40P25942 uc_338.25-201ENST00000613756 156 ntBASIC2.76□□□□□ -1.97
CD40P25942 U4atac.1-201ENST00000618345 95 ntBASIC2.76□□□□□ -1.97
CD40P25942 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
CD40P25942 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.75□□□□□ -1.97
CD40P25942 AC009487.4-201ENST00000624969 3585 ntBASIC2.75□□□□□ -1.97
CD40P25942 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD40P25942 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CD40P25942 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD40P25942 MIR340-201ENST00000362125 95 ntBASIC2.75□□□□□ -1.97
CD40P25942 SNORA7.4-201ENST00000384249 137 ntBASIC2.75□□□□□ -1.97
CD40P25942 AL031121.1-201ENST00000406553 254 ntBASIC2.75□□□□□ -1.97
CD40P25942 RPL23AP7-203ENST00000449021 469 ntBASIC2.75□□□□□ -1.97
CD40P25942 AC010598.1-201ENST00000510378 103 ntBASIC2.75□□□□□ -1.97
CD40P25942 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
CD40P25942 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.75□□□□□ -1.97
CD40P25942 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.75□□□□□ -1.97
CD40P25942 MIR3186-201ENST00000577404 85 ntBASIC2.75□□□□□ -1.97
CD40P25942 AC011921.3-201ENST00000605540 361 ntBASIC2.75□□□□□ -1.97
CD40P25942 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.75□□□□□ -1.97
CD40P25942 AL008718.3-201ENST00000610217 321 ntBASIC2.75□□□□□ -1.97
CD40P25942 AL162274.2-201ENST00000614406 332 ntBASIC2.75□□□□□ -1.97
CD40P25942 AC073349.3-201ENST00000617616 186 ntBASIC2.75□□□□□ -1.97
CD40P25942 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD40P25942 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CD40P25942 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.75□□□□□ -1.97
CD40P25942 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.75□□□□□ -1.97
CD40P25942 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CD40P25942 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD40P25942 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
CD40P25942 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
CD40P25942 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
CD40P25942 MIR411-201ENST00000362239 96 ntBASIC2.74□□□□□ -1.97
CD40P25942 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
CD40P25942 SNORA27.1-201ENST00000362604 124 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNU6-1240P-201ENST00000365155 104 ntBASIC2.74□□□□□ -1.97
CD40P25942 Y_RNA.341-201ENST00000365341 102 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNU6-763P-201ENST00000390865 106 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNU2-64P-201ENST00000411315 191 ntBASIC2.74□□□□□ -1.97
CD40P25942 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNU7-26P-201ENST00000458980 63 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNA5SP341-201ENST00000516261 117 ntBASIC2.74□□□□□ -1.97
CD40P25942 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.74□□□□□ -1.97
CD40P25942 SNORA81.3-201ENST00000517283 198 ntBASIC2.74□□□□□ -1.97
CD40P25942 AC024405.2-202ENST00000532731 184 ntBASIC2.74□□□□□ -1.97
CD40P25942 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.73□□□□□ -1.97
CD40P25942 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CD40P25942 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD40P25942 RNU6-801P-201ENST00000364087 105 ntBASIC2.73□□□□□ -1.97
CD40P25942 AP002088.1-201ENST00000382740 395 ntBASIC2.73□□□□□ -1.97
CD40P25942 SNORA26.5-201ENST00000391215 123 ntBASIC2.73□□□□□ -1.97
CD40P25942 SRIP3-201ENST00000413200 219 ntBASIC2.73□□□□□ -1.97
CD40P25942 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
CD40P25942 Y_RNA.637-201ENST00000459424 114 ntBASIC2.73□□□□□ -1.97
CD40P25942 Y_RNA.700-201ENST00000516806 100 ntBASIC2.73□□□□□ -1.97
CD40P25942 RNU6-856P-201ENST00000516959 98 ntBASIC2.73□□□□□ -1.97
CD40P25942 AC136628.3-201ENST00000521868 290 ntBASIC2.73□□□□□ -1.97
CD40P25942 NDUFA5P6-201ENST00000542110 379 ntBASIC2.73□□□□□ -1.97
CD40P25942 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.73□□□□□ -1.97
CD40P25942 UBL5P2-201ENST00000583788 219 ntBASIC2.73□□□□□ -1.97
CD40P25942 MIR7153-201ENST00000637758 57 ntBASIC2.73□□□□□ -1.97
CD40P25942 MIR622-201ENST00000638396 96 ntBASIC2.73□□□□□ -1.97
CD40P25942 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD40P25942 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CD40P25942 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CD40P25942 AC134026.1-201ENST00000623249 2239 ntBASIC2.72□□□□□ -1.97
CD40P25942 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CD40P25942 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CD40P25942 Y_RNA.29-201ENST00000362570 113 ntBASIC2.72□□□□□ -1.97
CD40P25942 Y_RNA.172-201ENST00000363765 102 ntBASIC2.72□□□□□ -1.97
CD40P25942 RNU6-271P-201ENST00000363858 105 ntBASIC2.72□□□□□ -1.97
CD40P25942 RNU6-1048P-201ENST00000364054 107 ntBASIC2.72□□□□□ -1.97
CD40P25942 Y_RNA.368-201ENST00000365547 113 ntBASIC2.72□□□□□ -1.97
CD40P25942 Y_RNA.785-201ENST00000384290 109 ntBASIC2.72□□□□□ -1.97
CD40P25942 SNORD15B-201ENST00000384714 146 ntBASIC2.72□□□□□ -1.97
CD40P25942 NDUFB4P4-201ENST00000404822 243 ntBASIC2.72□□□□□ -1.97
CD40P25942 AL138752.1-201ENST00000452964 351 ntBASIC2.72□□□□□ -1.97
CD40P25942 U8.19-201ENST00000459095 133 ntBASIC2.72□□□□□ -1.97
CD40P25942 S100A11P2-201ENST00000467589 312 ntBASIC2.72□□□□□ -1.97
CD40P25942 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40P25942 COX6CP14-201ENST00000469580 174 ntBASIC2.72□□□□□ -1.97
CD40P25942 RPS26P55-201ENST00000471178 356 ntBASIC2.72□□□□□ -1.97
CD40P25942 AC010409.1-201ENST00000487382 476 ntBASIC2.72□□□□□ -1.97
CD40P25942 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.72□□□□□ -1.97
CD40P25942 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40P25942 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40P25942 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.71□□□□□ -1.98
CD40P25942 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CD40P25942 SNORD114-7-201ENST00000362520 77 ntBASIC2.71□□□□□ -1.98
CD40P25942 Y_RNA.310-201ENST00000365063 113 ntBASIC2.71□□□□□ -1.98
CD40P25942 MIR1262-201ENST00000408276 93 ntBASIC2.71□□□□□ -1.98
CD40P25942 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.71□□□□□ -1.98
CD40P25942 HMGN1P18-201ENST00000457642 277 ntBASIC2.71□□□□□ -1.98
CD40P25942 Y_RNA.644-201ENST00000459006 113 ntBASIC2.71□□□□□ -1.98
CD40P25942 AC010401.1-201ENST00000463867 348 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms