Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.89□□□□□ -1.95
XPAP23025 AC091826.1-201ENST00000514065 313 ntBASIC2.89□□□□□ -1.95
XPAP23025 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.89□□□□□ -1.95
XPAP23025 DEFB117-201ENST00000602356 141 ntBASIC2.89□□□□□ -1.95
XPAP23025 AC008873.1-201ENST00000625051 138 ntBASIC2.89□□□□□ -1.95
XPAP23025 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
XPAP23025 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
XPAP23025 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.88□□□□□ -1.95
XPAP23025 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
XPAP23025 SNORA38-201ENST00000363946 132 ntBASIC2.88□□□□□ -1.95
XPAP23025 Y_RNA.274-201ENST00000364714 101 ntBASIC2.88□□□□□ -1.95
XPAP23025 RPL21P3-201ENST00000395517 478 ntBASIC2.88□□□□□ -1.95
XPAP23025 AC087499.2-201ENST00000432861 149 ntBASIC2.88□□□□□ -1.95
XPAP23025 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
XPAP23025 AP001486.1-201ENST00000463339 476 ntBASIC2.88□□□□□ -1.95
XPAP23025 HMGN2P9-201ENST00000476875 229 ntBASIC2.88□□□□□ -1.95
XPAP23025 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.88□□□□□ -1.95
XPAP23025 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
XPAP23025 AC037487.3-201ENST00000606668 112 ntBASIC2.88□□□□□ -1.95
XPAP23025 MIR1248-201ENST00000629190 106 ntBASIC2.88□□□□□ -1.95
XPAP23025 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
XPAP23025 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
XPAP23025 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
XPAP23025 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
XPAP23025 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
XPAP23025 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
XPAP23025 SNORA5B-201ENST00000363786 132 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNY1-201ENST00000364228 113 ntBASIC2.87□□□□□ -1.95
XPAP23025 Y_RNA.275-201ENST00000364726 110 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU6-200P-201ENST00000364743 107 ntBASIC2.87□□□□□ -1.95
XPAP23025 Y_RNA.329-201ENST00000365209 107 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU6-234P-201ENST00000365229 104 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU6-662P-201ENST00000384253 104 ntBASIC2.87□□□□□ -1.95
XPAP23025 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
XPAP23025 MIR586-201ENST00000385035 97 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU6-220P-201ENST00000390919 107 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.87□□□□□ -1.95
XPAP23025 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.87□□□□□ -1.95
XPAP23025 MTND5P15-201ENST00000434246 349 ntBASIC2.87□□□□□ -1.95
XPAP23025 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
XPAP23025 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.87□□□□□ -1.95
XPAP23025 RNU6-436P-201ENST00000516171 114 ntBASIC2.87□□□□□ -1.95
XPAP23025 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.87□□□□□ -1.95
XPAP23025 ELOCP29-201ENST00000588193 334 ntBASIC2.87□□□□□ -1.95
XPAP23025 RPL17P51-201ENST00000605218 238 ntBASIC2.87□□□□□ -1.95
XPAP23025 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
XPAP23025 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
XPAP23025 VTRNA1-1-201ENST00000363120 99 ntBASIC2.86□□□□□ -1.95
XPAP23025 RNU1-23P-201ENST00000363361 144 ntBASIC2.86□□□□□ -1.95
XPAP23025 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
XPAP23025 AL139095.1-201ENST00000404326 391 ntBASIC2.86□□□□□ -1.95
XPAP23025 U3.40-201ENST00000408706 208 ntBASIC2.86□□□□□ -1.95
XPAP23025 AL139156.1-201ENST00000412785 841 ntBASIC2.86□□□□□ -1.95
XPAP23025 AL135938.1-201ENST00000443141 297 ntBASIC2.86□□□□□ -1.95
XPAP23025 AL049873.1-201ENST00000480540 376 ntBASIC2.86□□□□□ -1.95
XPAP23025 SNORD116-28-201ENST00000516123 91 ntBASIC2.86□□□□□ -1.95
XPAP23025 RNU4-71P-201ENST00000516258 113 ntBASIC2.86□□□□□ -1.95
XPAP23025 SNORA27.4-201ENST00000516650 95 ntBASIC2.86□□□□□ -1.95
XPAP23025 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.86□□□□□ -1.95
XPAP23025 AC018630.3-201ENST00000542637 96 ntBASIC2.86□□□□□ -1.95
XPAP23025 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.86□□□□□ -1.95
XPAP23025 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.86□□□□□ -1.95
XPAP23025 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
XPAP23025 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
XPAP23025 Y_RNA.122-201ENST00000363331 96 ntBASIC2.85□□□□□ -1.95
XPAP23025 SNORA80A-201ENST00000363922 136 ntBASIC2.85□□□□□ -1.95
XPAP23025 RNU6-324P-201ENST00000363957 106 ntBASIC2.85□□□□□ -1.95
XPAP23025 RNU2-64P-201ENST00000411315 191 ntBASIC2.85□□□□□ -1.95
XPAP23025 AL139281.1-201ENST00000422120 335 ntBASIC2.85□□□□□ -1.95
XPAP23025 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.85□□□□□ -1.95
XPAP23025 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.85□□□□□ -1.95
XPAP23025 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.85□□□□□ -1.95
XPAP23025 RNU6-191P-201ENST00000516295 94 ntBASIC2.85□□□□□ -1.95
XPAP23025 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
XPAP23025 AL162424.1-201ENST00000602325 221 ntBASIC2.85□□□□□ -1.95
XPAP23025 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
XPAP23025 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
XPAP23025 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
XPAP23025 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
XPAP23025 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
XPAP23025 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.84□□□□□ -1.95
XPAP23025 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
XPAP23025 UBE2WP1-201ENST00000362030 340 ntBASIC2.84□□□□□ -1.95
XPAP23025 RNU1-35P-201ENST00000362782 153 ntBASIC2.84□□□□□ -1.95
XPAP23025 SNORD115-30-201ENST00000364117 82 ntBASIC2.84□□□□□ -1.95
XPAP23025 RNU6-514P-201ENST00000384208 107 ntBASIC2.84□□□□□ -1.95
XPAP23025 RNU6-1289P-201ENST00000384431 106 ntBASIC2.84□□□□□ -1.95
XPAP23025 MIR1283-1-201ENST00000408494 87 ntBASIC2.84□□□□□ -1.95
XPAP23025 MIR1298-201ENST00000408783 112 ntBASIC2.84□□□□□ -1.95
XPAP23025 RNU2-32P-201ENST00000411193 191 ntBASIC2.84□□□□□ -1.95
XPAP23025 TOMM22P2-201ENST00000430735 237 ntBASIC2.84□□□□□ -1.95
XPAP23025 AC105272.1-201ENST00000438604 198 ntBASIC2.84□□□□□ -1.95
XPAP23025 GTF3AP2-201ENST00000557014 266 ntBASIC2.84□□□□□ -1.95
XPAP23025 AC006380.1-201ENST00000603598 186 ntBASIC2.84□□□□□ -1.95
XPAP23025 AC005828.6-201ENST00000606610 232 ntBASIC2.84□□□□□ -1.95
XPAP23025 U6.115-201ENST00000636045 103 ntBASIC2.84□□□□□ -1.95
XPAP23025 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
XPAP23025 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
XPAP23025 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
XPAP23025 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms