Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL353149.1-201ENST00000610667 244 ntBASIC3.01□□□□□ -1.93
ATF4P18848 MIR7151-201ENST00000617477 60 ntBASIC3.01□□□□□ -1.93
ATF4P18848 AL365265.1-201ENST00000621045 234 ntBASIC3.01□□□□□ -1.93
ATF4P18848 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ATF4P18848 AC017071.1-201ENST00000564407 2204 ntBASIC3□□□□□ -1.93
ATF4P18848 RNU1-22P-201ENST00000363334 158 ntBASIC3□□□□□ -1.93
ATF4P18848 RNA5SP493-201ENST00000364115 91 ntBASIC3□□□□□ -1.93
ATF4P18848 Y_RNA.293-201ENST00000364908 93 ntBASIC3□□□□□ -1.93
ATF4P18848 RNU6-376P-201ENST00000384731 106 ntBASIC3□□□□□ -1.93
ATF4P18848 MIR515-2-201ENST00000384883 83 ntBASIC3□□□□□ -1.93
ATF4P18848 MIR515-1-201ENST00000384884 83 ntBASIC3□□□□□ -1.93
ATF4P18848 AL355497.1-201ENST00000406262 551 ntBASIC3□□□□□ -1.93
ATF4P18848 RNU6-1186P-201ENST00000410429 97 ntBASIC3□□□□□ -1.93
ATF4P18848 RNU2-64P-201ENST00000411315 191 ntBASIC3□□□□□ -1.93
ATF4P18848 AC006989.1-201ENST00000427212 131 ntBASIC3□□□□□ -1.93
ATF4P18848 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3□□□□□ -1.93
ATF4P18848 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3□□□□□ -1.93
ATF4P18848 RNU7-141P-201ENST00000459304 62 ntBASIC3□□□□□ -1.93
ATF4P18848 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3□□□□□ -1.93
ATF4P18848 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3□□□□□ -1.93
ATF4P18848 MIR6868-201ENST00000611215 58 ntBASIC3□□□□□ -1.93
ATF4P18848 AL359075.3-201ENST00000613288 217 ntBASIC3□□□□□ -1.93
ATF4P18848 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF4P18848 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3□□□□□ -1.93
ATF4P18848 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
ATF4P18848 AC134026.1-201ENST00000623249 2239 ntBASIC2.99□□□□□ -1.93
ATF4P18848 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATF4P18848 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATF4P18848 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATF4P18848 RNU6-1205P-201ENST00000363625 106 ntBASIC2.99□□□□□ -1.93
ATF4P18848 RNA5SP399-201ENST00000364003 117 ntBASIC2.99□□□□□ -1.93
ATF4P18848 RNU6-1164P-201ENST00000364428 107 ntBASIC2.99□□□□□ -1.93
ATF4P18848 RNA5SP97-201ENST00000365006 84 ntBASIC2.99□□□□□ -1.93
ATF4P18848 RNU6-144P-201ENST00000383951 107 ntBASIC2.99□□□□□ -1.93
ATF4P18848 SNORD116-13-201ENST00000384408 92 ntBASIC2.99□□□□□ -1.93
ATF4P18848 MIR134-201ENST00000385258 73 ntBASIC2.99□□□□□ -1.93
ATF4P18848 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
ATF4P18848 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF4P18848 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF4P18848 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF4P18848 AC011921.3-201ENST00000605540 361 ntBASIC2.99□□□□□ -1.93
ATF4P18848 AC004832.4-201ENST00000608952 331 ntBASIC2.99□□□□□ -1.93
ATF4P18848 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.99□□□□□ -1.93
ATF4P18848 MIR338-201ENST00000636369 67 ntBASIC2.99□□□□□ -1.93
ATF4P18848 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
ATF4P18848 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.98□□□□□ -1.93
ATF4P18848 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATF4P18848 RNU1-58P-201ENST00000362413 163 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNU6-1020P-201ENST00000363684 107 ntBASIC2.98□□□□□ -1.93
ATF4P18848 Y_RNA.172-201ENST00000363765 102 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNU6-1048P-201ENST00000364054 107 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNU6-1323P-201ENST00000384025 107 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNA5SP323-201ENST00000391094 133 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RPL21P3-201ENST00000395517 478 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AC018634.1-201ENST00000437554 401 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AC104332.1-201ENST00000440471 797 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AL133162.1-201ENST00000463228 453 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AC026402.1-201ENST00000513642 170 ntBASIC2.98□□□□□ -1.93
ATF4P18848 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.98□□□□□ -1.93
ATF4P18848 RNU1-142P-201ENST00000516682 145 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNU6-63P-201ENST00000516690 95 ntBASIC2.98□□□□□ -1.93
ATF4P18848 RNA5SP179-201ENST00000517284 121 ntBASIC2.98□□□□□ -1.93
ATF4P18848 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AC107934.2-201ENST00000518653 310 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.98□□□□□ -1.93
ATF4P18848 MIR1254-2-201ENST00000579553 63 ntBASIC2.98□□□□□ -1.93
ATF4P18848 LARP7P3-201ENST00000579888 337 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AC022202.1-201ENST00000613515 211 ntBASIC2.98□□□□□ -1.93
ATF4P18848 MIR548AY-201ENST00000617669 107 ntBASIC2.98□□□□□ -1.93
ATF4P18848 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.98□□□□□ -1.93
ATF4P18848 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ATF4P18848 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
ATF4P18848 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATF4P18848 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ATF4P18848 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATF4P18848 RNA5SP130-201ENST00000364431 114 ntBASIC2.97□□□□□ -1.93
ATF4P18848 Y_RNA.308-201ENST00000365043 101 ntBASIC2.97□□□□□ -1.93
ATF4P18848 RNU6-117P-201ENST00000365415 107 ntBASIC2.97□□□□□ -1.93
ATF4P18848 MIR554-201ENST00000384874 96 ntBASIC2.97□□□□□ -1.93
ATF4P18848 RPL21P65-201ENST00000406094 466 ntBASIC2.97□□□□□ -1.93
ATF4P18848 RNU6ATAC-201ENST00000408749 126 ntBASIC2.97□□□□□ -1.93
ATF4P18848 SNORA11.4-201ENST00000408823 129 ntBASIC2.97□□□□□ -1.93
ATF4P18848 EBAG9P1-201ENST00000418955 543 ntBASIC2.97□□□□□ -1.93
ATF4P18848 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.97□□□□□ -1.93
ATF4P18848 AL162725.1-201ENST00000435405 301 ntBASIC2.97□□□□□ -1.93
ATF4P18848 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.97□□□□□ -1.93
ATF4P18848 AC117454.1-201ENST00000491120 168 ntBASIC2.97□□□□□ -1.93
ATF4P18848 YWHAEP4-201ENST00000505390 198 ntBASIC2.97□□□□□ -1.93
ATF4P18848 RNU7-99P-201ENST00000516271 62 ntBASIC2.97□□□□□ -1.93
ATF4P18848 RNU7-115P-201ENST00000516433 55 ntBASIC2.97□□□□□ -1.93
ATF4P18848 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.97□□□□□ -1.93
ATF4P18848 POLR3GP1-201ENST00000594073 261 ntBASIC2.97□□□□□ -1.93
ATF4P18848 AC091167.4-201ENST00000605079 184 ntBASIC2.97□□□□□ -1.93
ATF4P18848 AC098479.1-201ENST00000609225 154 ntBASIC2.97□□□□□ -1.93
ATF4P18848 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.97□□□□□ -1.93
ATF4P18848 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.96□□□□□ -1.93
ATF4P18848 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ATF4P18848 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
ATF4P18848 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms