Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RPS27P1-201ENST00000450552 247 ntBASIC3.7□□□□□ -1.82
PTPRAP18433 CENPBD1P1-201ENST00000464061 469 ntBASIC3.7□□□□□ -1.82
PTPRAP18433 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPRAP18433 AP001328.1-201ENST00000528550 176 ntBASIC3.7□□□□□ -1.82
PTPRAP18433 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPRAP18433 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPRAP18433 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 Y_RNA.393-201ENST00000383936 102 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 MIR586-201ENST00000385035 97 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 MIR1185-2-201ENST00000408687 86 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 SNORA36B-201ENST00000410438 131 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PTPRAP18433 RNU7-107P-201ENST00000459121 61 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 RPL36AP48-201ENST00000485521 314 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 RNU7-115P-201ENST00000516433 55 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.69□□□□□ -1.82
PTPRAP18433 AC006023.1-201ENST00000603944 259 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 AP001340.1-201ENST00000624405 217 ntBASIC3.69□□□□□ -1.82
PTPRAP18433 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPRAP18433 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PTPRAP18433 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPRAP18433 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPRAP18433 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPRAP18433 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 RNU6-834P-201ENST00000362367 110 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 SNORA71.1-201ENST00000364523 117 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 RNU6-1056P-201ENST00000383996 107 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 Y_RNA.525-201ENST00000384570 113 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 RNA5SP38-201ENST00000410750 119 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 CYCSP49-201ENST00000420810 319 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 AC010154.1-201ENST00000425857 269 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 RPL23AP7-203ENST00000449021 469 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 HMGN2P9-201ENST00000476875 229 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 AC079598.5-201ENST00000547460 117 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 RPL12P50-201ENST00000603116 116 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 U7.2-201ENST00000607576 63 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
PTPRAP18433 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPRAP18433 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPRAP18433 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPRAP18433 SNORD116-13-201ENST00000384408 92 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 MIR518C-201ENST00000384822 101 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 AL139095.1-201ENST00000404326 391 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 AL355796.1-201ENST00000406706 323 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.67□□□□□ -1.82
PTPRAP18433 RPS27P26-201ENST00000494583 239 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 RNU6-1337P-201ENST00000516525 95 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 RNU6-1098P-201ENST00000516772 96 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 MIR2276-201ENST00000516886 89 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 AL031274.2-201ENST00000599419 203 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 AC010680.1-201ENST00000590024 3590 ntBASIC3.67□□□□□ -1.82
PTPRAP18433 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPRAP18433 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PTPRAP18433 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PTPRAP18433 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPRAP18433 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPRAP18433 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPRAP18433 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPRAP18433 Y_RNA.251-201ENST00000364551 99 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 SNORA51.4-201ENST00000364993 124 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 Y_RNA.563-201ENST00000384707 108 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 SNORD15B-201ENST00000384714 146 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 RNA5SP252-201ENST00000391131 119 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 MIR873-201ENST00000401120 77 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 RNU4-43P-201ENST00000410628 137 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 Y_RNA.622-201ENST00000411091 108 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 AC002075.2-201ENST00000425207 252 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 AL121890.1-201ENST00000435457 205 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 EEF1B2P7-201ENST00000451177 676 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPRAP18433 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
PTPRAP18433 AC006111.3-201ENST00000622137 383 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPRAP18433 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.66□□□□□ -1.82
PTPRAP18433 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PTPRAP18433 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTPRAP18433 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPRAP18433 SNORD32B-201ENST00000364460 84 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 RNU6-915P-201ENST00000364943 103 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 SNORA75.5-201ENST00000391291 81 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 RHEBP3-201ENST00000411920 351 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 HSPE1P13-201ENST00000451143 297 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPRAP18433 RNU5F-4P-201ENST00000516581 114 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPRAP18433 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPRAP18433 RPL17P51-201ENST00000605218 238 ntBASIC3.65□□□□□ -1.83
PTPRAP18433 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms