Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
RARAP10276 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RARAP10276 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RARAP10276 Y_RNA.43-201ENST00000362670 111 ntBASIC3.67□□□□□ -1.82
RARAP10276 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
RARAP10276 U8.1-201ENST00000362843 134 ntBASIC3.67□□□□□ -1.82
RARAP10276 Y_RNA.432-201ENST00000384087 111 ntBASIC3.67□□□□□ -1.82
RARAP10276 RNU6-975P-201ENST00000384296 105 ntBASIC3.67□□□□□ -1.82
RARAP10276 RNU2-55P-201ENST00000411146 174 ntBASIC3.67□□□□□ -1.82
RARAP10276 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
RARAP10276 PRSS3P4-201ENST00000453323 162 ntBASIC3.67□□□□□ -1.82
RARAP10276 RNA5SP20-201ENST00000515976 84 ntBASIC3.67□□□□□ -1.82
RARAP10276 AL160236.1-201ENST00000556317 195 ntBASIC3.67□□□□□ -1.82
RARAP10276 U4.6-201ENST00000621618 127 ntBASIC3.67□□□□□ -1.82
RARAP10276 AC090517.3-201ENST00000625170 141 ntBASIC3.67□□□□□ -1.82
RARAP10276 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
RARAP10276 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.66□□□□□ -1.82
RARAP10276 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RARAP10276 AC008155.2-201ENST00000464337 397 ntBASIC3.66□□□□□ -1.82
RARAP10276 RNU1-95P-201ENST00000516357 160 ntBASIC3.66□□□□□ -1.82
RARAP10276 Y_RNA.692-201ENST00000516627 105 ntBASIC3.66□□□□□ -1.82
RARAP10276 RNU1-128P-201ENST00000516704 160 ntBASIC3.66□□□□□ -1.82
RARAP10276 AC027419.1-201ENST00000522976 328 ntBASIC3.66□□□□□ -1.82
RARAP10276 MIR3613-201ENST00000579844 87 ntBASIC3.66□□□□□ -1.82
RARAP10276 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.66□□□□□ -1.82
RARAP10276 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
RARAP10276 U6.95-201ENST00000636931 70 ntBASIC3.66□□□□□ -1.82
RARAP10276 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RARAP10276 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
RARAP10276 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RARAP10276 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RARAP10276 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.66□□□□□ -1.82
RARAP10276 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.66□□□□□ -1.82
RARAP10276 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
RARAP10276 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.82
RARAP10276 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
RARAP10276 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
RARAP10276 Y_RNA.120-201ENST00000363304 110 ntBASIC3.65□□□□□ -1.83
RARAP10276 DYNLT3P1-201ENST00000378574 347 ntBASIC3.65□□□□□ -1.83
RARAP10276 MIR1294-201ENST00000408503 142 ntBASIC3.65□□□□□ -1.83
RARAP10276 RNU6-57P-201ENST00000411348 103 ntBASIC3.65□□□□□ -1.83
RARAP10276 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.65□□□□□ -1.83
RARAP10276 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.65□□□□□ -1.83
RARAP10276 AC090515.1-201ENST00000465295 476 ntBASIC3.65□□□□□ -1.83
RARAP10276 RNU5E-3P-201ENST00000515913 68 ntBASIC3.65□□□□□ -1.83
RARAP10276 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.65□□□□□ -1.83
RARAP10276 AC006130.2-201ENST00000586202 326 ntBASIC3.65□□□□□ -1.83
RARAP10276 AL049861.1-201ENST00000603130 150 ntBASIC3.65□□□□□ -1.83
RARAP10276 AC006111.3-201ENST00000622137 383 ntBASIC3.65□□□□□ -1.83
RARAP10276 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RARAP10276 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RARAP10276 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RARAP10276 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RARAP10276 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.64□□□□□ -1.83
RARAP10276 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RARAP10276 SNORA22-201ENST00000383907 134 ntBASIC3.64□□□□□ -1.83
RARAP10276 RN7SKP202-201ENST00000410439 330 ntBASIC3.64□□□□□ -1.83
RARAP10276 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
RARAP10276 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
RARAP10276 AL158147.1-201ENST00000443970 75 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC016717.1-201ENST00000448918 286 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC016925.1-201ENST00000458303 298 ntBASIC3.64□□□□□ -1.83
RARAP10276 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
RARAP10276 U3.44-201ENST00000458938 192 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC010531.2-201ENST00000465012 153 ntBASIC3.64□□□□□ -1.83
RARAP10276 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
RARAP10276 ATP5EP1-201ENST00000510257 156 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC104619.4-201ENST00000510773 249 ntBASIC3.64□□□□□ -1.83
RARAP10276 RN7SKP18-201ENST00000516005 275 ntBASIC3.64□□□□□ -1.83
RARAP10276 RNU6-1299P-201ENST00000516316 100 ntBASIC3.64□□□□□ -1.83
RARAP10276 SNORA70.19-201ENST00000516717 90 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.64□□□□□ -1.83
RARAP10276 AC103810.1-201ENST00000579873 453 ntBASIC3.64□□□□□ -1.83
RARAP10276 MIR4513-201ENST00000581077 86 ntBASIC3.64□□□□□ -1.83
RARAP10276 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
RARAP10276 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.64□□□□□ -1.83
RARAP10276 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.64□□□□□ -1.83
RARAP10276 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RARAP10276 MTND5P32-201ENST00000560711 1802 ntBASIC3.63□□□□□ -1.83
RARAP10276 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RARAP10276 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RARAP10276 RNA5SP267-201ENST00000364893 126 ntBASIC3.63□□□□□ -1.83
RARAP10276 RNU6-234P-201ENST00000365229 104 ntBASIC3.63□□□□□ -1.83
RARAP10276 RNU6-1080P-201ENST00000383982 107 ntBASIC3.63□□□□□ -1.83
RARAP10276 RNA5SP511-201ENST00000410487 115 ntBASIC3.63□□□□□ -1.83
RARAP10276 SNORA74D-201ENST00000516404 141 ntBASIC3.63□□□□□ -1.83
RARAP10276 RNA5SP170-201ENST00000517150 101 ntBASIC3.63□□□□□ -1.83
RARAP10276 AC109329.2-201ENST00000519658 482 ntBASIC3.63□□□□□ -1.83
RARAP10276 AC015720.1-201ENST00000565251 277 ntBASIC3.63□□□□□ -1.83
RARAP10276 MIR3121-201ENST00000579680 77 ntBASIC3.63□□□□□ -1.83
RARAP10276 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.63□□□□□ -1.83
RARAP10276 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.63□□□□□ -1.83
RARAP10276 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RARAP10276 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RARAP10276 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RARAP10276 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
RARAP10276 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.63□□□□□ -1.83
RARAP10276 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
RARAP10276 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms