Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
THBS1P07996 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.67□□□□□ -1.82
THBS1P07996 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
THBS1P07996 MIR372-201ENST00000362225 67 ntBASIC3.67□□□□□ -1.82
THBS1P07996 RNU1-22P-201ENST00000363334 158 ntBASIC3.67□□□□□ -1.82
THBS1P07996 EIF4EP4-201ENST00000424916 578 ntBASIC3.67□□□□□ -1.82
THBS1P07996 AC026726.1-201ENST00000512859 601 ntBASIC3.67□□□□□ -1.82
THBS1P07996 AC097462.1-201ENST00000514125 324 ntBASIC3.67□□□□□ -1.82
THBS1P07996 AL360157.1-201ENST00000565962 87 ntBASIC3.67□□□□□ -1.82
THBS1P07996 MIR6868-201ENST00000611215 58 ntBASIC3.67□□□□□ -1.82
THBS1P07996 MIR1245B-201ENST00000636115 69 ntBASIC3.67□□□□□ -1.82
THBS1P07996 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
THBS1P07996 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
THBS1P07996 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
THBS1P07996 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
THBS1P07996 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
THBS1P07996 RNU6-888P-201ENST00000363010 101 ntBASIC3.66□□□□□ -1.82
THBS1P07996 SNORA1-201ENST00000384107 130 ntBASIC3.66□□□□□ -1.82
THBS1P07996 MIR520G-201ENST00000385064 90 ntBASIC3.66□□□□□ -1.82
THBS1P07996 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.66□□□□□ -1.82
THBS1P07996 AL500522.2-201ENST00000448562 343 ntBASIC3.66□□□□□ -1.82
THBS1P07996 RNU6-1149P-201ENST00000516810 97 ntBASIC3.66□□□□□ -1.82
THBS1P07996 RNU7-172P-201ENST00000517125 64 ntBASIC3.66□□□□□ -1.82
THBS1P07996 AP000867.2-201ENST00000532468 320 ntBASIC3.66□□□□□ -1.82
THBS1P07996 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.66□□□□□ -1.82
THBS1P07996 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
THBS1P07996 MIR4444-1-201ENST00000581696 74 ntBASIC3.66□□□□□ -1.82
THBS1P07996 MIR4444-2-201ENST00000584390 74 ntBASIC3.66□□□□□ -1.82
THBS1P07996 AL035470.1-201ENST00000622571 220 ntBASIC3.66□□□□□ -1.82
THBS1P07996 AC090517.3-201ENST00000625170 141 ntBASIC3.66□□□□□ -1.82
THBS1P07996 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
THBS1P07996 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
THBS1P07996 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
THBS1P07996 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
THBS1P07996 RNA5SP399-201ENST00000364003 117 ntBASIC3.65□□□□□ -1.83
THBS1P07996 Y_RNA.366-201ENST00000365540 102 ntBASIC3.65□□□□□ -1.83
THBS1P07996 MIR488-201ENST00000365739 83 ntBASIC3.65□□□□□ -1.83
THBS1P07996 MIR181B1-201ENST00000385240 110 ntBASIC3.65□□□□□ -1.83
THBS1P07996 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.65□□□□□ -1.83
THBS1P07996 AL162151.2-201ENST00000448875 158 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC016717.1-201ENST00000448918 286 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC011406.1-201ENST00000512440 370 ntBASIC3.65□□□□□ -1.83
THBS1P07996 MIR5009-201ENST00000578736 100 ntBASIC3.65□□□□□ -1.83
THBS1P07996 MIR4438-201ENST00000585271 93 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC244505.7-201ENST00000599675 272 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC015726.2-201ENST00000620112 122 ntBASIC3.65□□□□□ -1.83
THBS1P07996 FAM35DP-201ENST00000323387 2712 ntBASIC3.65□□□□□ -1.83
THBS1P07996 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
THBS1P07996 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
THBS1P07996 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
THBS1P07996 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
THBS1P07996 AL161912.2-201ENST00000565707 3007 ntBASIC3.65□□□□□ -1.83
THBS1P07996 AC002546.1-201ENST00000588041 2504 ntBASIC3.65□□□□□ -1.83
THBS1P07996 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
THBS1P07996 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
THBS1P07996 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.64□□□□□ -1.83
THBS1P07996 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
THBS1P07996 AL117339.2-201ENST00000430475 180 ntBASIC3.64□□□□□ -1.83
THBS1P07996 AC109327.2-201ENST00000448339 378 ntBASIC3.64□□□□□ -1.83
THBS1P07996 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
THBS1P07996 MIR486-1-201ENST00000612171 68 ntBASIC3.64□□□□□ -1.83
THBS1P07996 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
THBS1P07996 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.64□□□□□ -1.83
THBS1P07996 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
THBS1P07996 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
THBS1P07996 Y_RNA.219-201ENST00000364232 113 ntBASIC3.63□□□□□ -1.83
THBS1P07996 Y_RNA.362-201ENST00000365518 110 ntBASIC3.63□□□□□ -1.83
THBS1P07996 RNU6-438P-201ENST00000365561 103 ntBASIC3.63□□□□□ -1.83
THBS1P07996 RNA5SP283-201ENST00000365604 119 ntBASIC3.63□□□□□ -1.83
THBS1P07996 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.63□□□□□ -1.83
THBS1P07996 MTATP8P2-201ENST00000435212 202 ntBASIC3.63□□□□□ -1.83
THBS1P07996 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.63□□□□□ -1.83
THBS1P07996 HMGN2P7-201ENST00000456186 273 ntBASIC3.63□□□□□ -1.83
THBS1P07996 SNORA84-201ENST00000459229 133 ntBASIC3.63□□□□□ -1.83
THBS1P07996 RPS26P48-201ENST00000491713 339 ntBASIC3.63□□□□□ -1.83
THBS1P07996 AC096725.1-201ENST00000514266 313 ntBASIC3.63□□□□□ -1.83
THBS1P07996 SNORA67.7-201ENST00000516664 135 ntBASIC3.63□□□□□ -1.83
THBS1P07996 YPEL5P3-201ENST00000547227 352 ntBASIC3.63□□□□□ -1.83
THBS1P07996 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.63□□□□□ -1.83
THBS1P07996 SNORD115-40-201ENST00000606510 82 ntBASIC3.63□□□□□ -1.83
THBS1P07996 AC013412.1-201ENST00000610687 192 ntBASIC3.63□□□□□ -1.83
THBS1P07996 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.63□□□□□ -1.83
THBS1P07996 AC025521.1-201ENST00000621624 286 ntBASIC3.63□□□□□ -1.83
THBS1P07996 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
THBS1P07996 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
THBS1P07996 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
THBS1P07996 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
THBS1P07996 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.62□□□□□ -1.83
THBS1P07996 RNU1-89P-201ENST00000384592 164 ntBASIC3.62□□□□□ -1.83
THBS1P07996 MIR590-201ENST00000385008 97 ntBASIC3.62□□□□□ -1.83
THBS1P07996 HMGN2P16-201ENST00000456802 261 ntBASIC3.62□□□□□ -1.83
THBS1P07996 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.62□□□□□ -1.83
THBS1P07996 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms