Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RPS3P1-201ENST00000456781 192 ntBASIC3.18□□□□□ -1.9
CHGBP05060 AC112771.1-201ENST00000463581 102 ntBASIC3.18□□□□□ -1.9
CHGBP05060 AC091021.1-201ENST00000468051 388 ntBASIC3.18□□□□□ -1.9
CHGBP05060 RPS27P26-201ENST00000494583 239 ntBASIC3.18□□□□□ -1.9
CHGBP05060 CYCSP23-201ENST00000519781 313 ntBASIC3.18□□□□□ -1.9
CHGBP05060 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
CHGBP05060 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.18□□□□□ -1.9
CHGBP05060 AC008739.2-201ENST00000597006 317 ntBASIC3.18□□□□□ -1.9
CHGBP05060 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHGBP05060 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHGBP05060 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.18□□□□□ -1.9
CHGBP05060 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHGBP05060 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHGBP05060 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHGBP05060 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHGBP05060 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.17□□□□□ -1.9
CHGBP05060 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.17□□□□□ -1.9
CHGBP05060 snoU2_19.1-201ENST00000362361 80 ntBASIC3.17□□□□□ -1.9
CHGBP05060 Y_RNA.170-201ENST00000363746 110 ntBASIC3.17□□□□□ -1.9
CHGBP05060 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
CHGBP05060 RNU6-211P-201ENST00000384047 107 ntBASIC3.17□□□□□ -1.9
CHGBP05060 RNU6-1199P-201ENST00000411249 104 ntBASIC3.17□□□□□ -1.9
CHGBP05060 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
CHGBP05060 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
CHGBP05060 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.17□□□□□ -1.9
CHGBP05060 HMGB3P3-201ENST00000510526 400 ntBASIC3.17□□□□□ -1.9
CHGBP05060 RNU6-1219P-201ENST00000516143 112 ntBASIC3.17□□□□□ -1.9
CHGBP05060 HSPE1P18-201ENST00000517602 280 ntBASIC3.17□□□□□ -1.9
CHGBP05060 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.17□□□□□ -1.9
CHGBP05060 MIR4308-201ENST00000580634 81 ntBASIC3.17□□□□□ -1.9
CHGBP05060 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.17□□□□□ -1.9
CHGBP05060 AC007336.1-201ENST00000576365 3828 ntBASIC3.16□□□□□ -1.9
CHGBP05060 RNU1-62P-201ENST00000362599 164 ntBASIC3.16□□□□□ -1.9
CHGBP05060 Y_RNA.217-201ENST00000364214 105 ntBASIC3.16□□□□□ -1.9
CHGBP05060 Y_RNA.329-201ENST00000365209 107 ntBASIC3.16□□□□□ -1.9
CHGBP05060 MIR9-1-201ENST00000385198 89 ntBASIC3.16□□□□□ -1.9
CHGBP05060 RNA5SP210-201ENST00000391034 120 ntBASIC3.16□□□□□ -1.9
CHGBP05060 RNA5SP354-201ENST00000391247 136 ntBASIC3.16□□□□□ -1.9
CHGBP05060 RNA5SP184-201ENST00000411071 108 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AL606753.1-201ENST00000427435 87 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AC004386.2-201ENST00000441858 148 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.16□□□□□ -1.9
CHGBP05060 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.16□□□□□ -1.9
CHGBP05060 SNORD2.1-201ENST00000458762 69 ntBASIC3.16□□□□□ -1.9
CHGBP05060 Y_RNA.641-201ENST00000459414 105 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
CHGBP05060 SNORD19.2-201ENST00000516978 73 ntBASIC3.16□□□□□ -1.9
CHGBP05060 MTND5P41-201ENST00000517498 206 ntBASIC3.16□□□□□ -1.9
CHGBP05060 MIR5006-201ENST00000583027 110 ntBASIC3.16□□□□□ -1.9
CHGBP05060 RPL12P50-201ENST00000603116 116 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AC006380.1-201ENST00000603598 186 ntBASIC3.16□□□□□ -1.9
CHGBP05060 PCGEM1.1-201ENST00000613431 131 ntBASIC3.16□□□□□ -1.9
CHGBP05060 AL365265.1-201ENST00000621045 234 ntBASIC3.16□□□□□ -1.9
CHGBP05060 SCARNA15.3-201ENST00000626315 122 ntBASIC3.16□□□□□ -1.9
CHGBP05060 SCARNA4.1-201ENST00000628597 123 ntBASIC3.16□□□□□ -1.9
CHGBP05060 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHGBP05060 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHGBP05060 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHGBP05060 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CHGBP05060 RNU6-859P-201ENST00000362728 107 ntBASIC3.15□□□□□ -1.91
CHGBP05060 Y_RNA.262-201ENST00000364641 102 ntBASIC3.15□□□□□ -1.91
CHGBP05060 RNU6-1310P-201ENST00000384153 107 ntBASIC3.15□□□□□ -1.91
CHGBP05060 RNU2-54P-201ENST00000410299 190 ntBASIC3.15□□□□□ -1.91
CHGBP05060 AC004866.1-201ENST00000411748 78 ntBASIC3.15□□□□□ -1.91
CHGBP05060 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.15□□□□□ -1.91
CHGBP05060 AC063976.3-201ENST00000426849 329 ntBASIC3.15□□□□□ -1.91
CHGBP05060 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
CHGBP05060 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.15□□□□□ -1.91
CHGBP05060 RNU6-1212P-201ENST00000517023 104 ntBASIC3.15□□□□□ -1.91
CHGBP05060 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.15□□□□□ -1.91
CHGBP05060 MRPS18CP4-201ENST00000535821 231 ntBASIC3.15□□□□□ -1.91
CHGBP05060 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.15□□□□□ -1.91
CHGBP05060 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.15□□□□□ -1.91
CHGBP05060 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.15□□□□□ -1.91
CHGBP05060 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.15□□□□□ -1.91
CHGBP05060 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
CHGBP05060 RNU4-15P-201ENST00000362613 141 ntBASIC3.14□□□□□ -1.91
CHGBP05060 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
CHGBP05060 MIR186-201ENST00000384988 86 ntBASIC3.14□□□□□ -1.91
CHGBP05060 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.14□□□□□ -1.91
CHGBP05060 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
CHGBP05060 CYCSP48-201ENST00000417124 323 ntBASIC3.14□□□□□ -1.91
CHGBP05060 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
CHGBP05060 RPL23AP70-201ENST00000483361 460 ntBASIC3.14□□□□□ -1.91
CHGBP05060 SNORA9.3-201ENST00000516383 129 ntBASIC3.14□□□□□ -1.91
CHGBP05060 DEFB131C-201ENST00000528817 165 ntBASIC3.14□□□□□ -1.91
CHGBP05060 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHGBP05060 AL356575.1-201ENST00000603008 283 ntBASIC3.14□□□□□ -1.91
CHGBP05060 AC005562.2-201ENST00000618264 111 ntBASIC3.14□□□□□ -1.91
CHGBP05060 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.14□□□□□ -1.91
CHGBP05060 AL136360.1-201ENST00000503377 1900 ntBASIC3.13□□□□□ -1.91
CHGBP05060 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHGBP05060 RNU6-1010P-201ENST00000362757 107 ntBASIC3.13□□□□□ -1.91
CHGBP05060 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHGBP05060 RNU6-750P-201ENST00000390946 107 ntBASIC3.13□□□□□ -1.91
CHGBP05060 SNORA12-201ENST00000391162 147 ntBASIC3.13□□□□□ -1.91
CHGBP05060 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
CHGBP05060 AIMP1P2-201ENST00000425294 312 ntBASIC3.13□□□□□ -1.91
CHGBP05060 RN7SL499P-201ENST00000481141 276 ntBASIC3.13□□□□□ -1.91
CHGBP05060 RPL36AP48-201ENST00000485521 314 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms