Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR660-201ENST00000385235 97 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 SNORD70.1-201ENST00000391007 85 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 Y_RNA.598-201ENST00000410480 95 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 Y_RNA.610-201ENST00000410681 103 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-57P-201ENST00000411348 103 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC245047.3-201ENST00000429428 127 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.22□□□□□ -2.37
COL1A1P02452 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 AC079781.2-201ENST00000446424 169 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 USP9YP12-201ENST00000450481 570 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 Vault.3-201ENST00000516676 95 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 SNORA25.17-201ENST00000517184 124 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.22□□□□□ -2.37
COL1A1P02452 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AP001180.6-201ENST00000584918 159 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC018714.1-201ENST00000605028 208 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC097065.2-201ENST00000608159 533 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 AC009159.2-201ENST00000617603 606 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 U6.108-201ENST00000637764 58 ntBASIC0.22□□□□□ -2.37
COL1A1P02452 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 MIR320B2-201ENST00000408479 138 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 RNU6-1186P-201ENST00000410429 97 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AC106883.1-201ENST00000418805 562 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AC008134.1-201ENST00000420943 193 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AL035398.1-201ENST00000430869 322 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.21□□□□□ -2.38
COL1A1P02452 AC009237.7-201ENST00000447357 229 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 EPS15P1-201ENST00000448836 336 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 LINC01399-202ENST00000458450 244 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AC091951.3-201ENST00000504093 246 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AC025647.1-201ENST00000517879 253 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 RNU6-323P-201ENST00000521915 107 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 MTND4P33-201ENST00000556706 766 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.21□□□□□ -2.38
COL1A1P02452 SNORA28-201ENST00000606769 126 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 AL078595.3-201ENST00000623815 1166 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 snoZ196.1-201ENST00000625269 89 ntBASIC0.21□□□□□ -2.38
COL1A1P02452 RNU5F-6P-201ENST00000362979 116 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU6-1097P-201ENST00000363586 107 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU5F-7P-201ENST00000363696 115 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU6-163P-201ENST00000384396 106 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 SNORD116-13-201ENST00000384408 92 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 MIR454-201ENST00000390180 115 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU4-46P-201ENST00000410818 138 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 MTND3P17-201ENST00000416968 344 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.2□□□□□ -2.38
COL1A1P02452 MTCO2P3-201ENST00000442543 421 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.2□□□□□ -2.38
COL1A1P02452 MTCO3P8-201ENST00000453691 755 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 MTATP6P14-201ENST00000455189 673 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 MTCO2P6-201ENST00000463134 685 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 AC010493.1-201ENST00000513479 292 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU6-410P-201ENST00000517006 107 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 RNU6-1220P-201ENST00000517126 108 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 DEFB131C-201ENST00000528817 165 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 AP002001.1-203ENST00000534002 267 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.2□□□□□ -2.38
COL1A1P02452 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.2□□□□□ -2.38
COL1A1P02452 AC080078.2-201ENST00000603766 501 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.2□□□□□ -2.38
COL1A1P02452 MTND4P5-201ENST00000435821 1374 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 MTND4P4-201ENST00000439033 1366 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
COL1A1P02452 RNU6-945P-201ENST00000383947 107 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU6-1029P-201ENST00000384109 107 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 Y_RNA.552-201ENST00000384665 112 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 SNORD99-201ENST00000408612 74 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNA5SP494-201ENST00000410653 129 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.19□□□□□ -2.38
COL1A1P02452 AL354692.1-201ENST00000423044 315 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.19□□□□□ -2.38
COL1A1P02452 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.19□□□□□ -2.38
COL1A1P02452 AC104850.1-201ENST00000435940 476 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 STAG3L5P-204ENST00000443759 179 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 SCARNA18-201ENST00000459004 134 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU6-221P-201ENST00000459541 99 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU6-1037P-201ENST00000459571 107 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC007215.1-201ENST00000464893 276 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.19□□□□□ -2.38
COL1A1P02452 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.19□□□□□ -2.38
COL1A1P02452 AC002350.1-201ENST00000490759 375 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU2-69P-201ENST00000516061 100 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU7-99P-201ENST00000516271 62 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 RNU2-46P-201ENST00000517038 113 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.19□□□□□ -2.38
COL1A1P02452 SUB1P2-201ENST00000556401 297 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.19□□□□□ -2.38
COL1A1P02452 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC025449.1-201ENST00000603896 529 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC002044.1-201ENST00000606707 158 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC091304.9-201ENST00000612091 226 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC244015.1-201ENST00000622301 99 ntBASIC0.19□□□□□ -2.38
COL1A1P02452 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
COL1A1P02452 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms