Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.12□□□□□ -2.43
ABCA1O95477 AC074133.1-201ENST00000515696 183 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AC109479.2-201ENST00000517842 174 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 DEFB131C-201ENST00000528817 165 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.12□□□□□ -2.43
ABCA1O95477 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.12□□□□□ -2.43
ABCA1O95477 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AP000943.4-201ENST00000622912 357 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-440P-201ENST00000390882 105 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-57P-201ENST00000411348 103 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA1O95477 TPT1P7-201ENST00000458300 517 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU7-57P-201ENST00000459540 60 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 OR9P1P-201ENST00000496431 281 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AC008628.2-201ENST00000502605 298 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RN7SKP12-201ENST00000516275 143 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.13□□□□□ -2.43
ABCA1O95477 SNORA28-201ENST00000606769 126 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AL139022.2-201ENST00000606934 443 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 SNORA25.18-201ENST00000607153 114 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 PART1_2.1-201ENST00000612397 250 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AL031667.3-201ENST00000620124 655 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU4-1-201ENST00000363925 141 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-61P-201ENST00000365528 109 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-298P-201ENST00000390888 96 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 RNU6-607P-201ENST00000411283 108 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.13□□□□□ -2.43
ABCA1O95477 TIMM9P3-201ENST00000428659 274 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA1O95477 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.13□□□□□ -2.43
ABCA1O95477 AF186996.7-201ENST00000492781 209 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.13□□□□□ -2.43
ABCA1O95477 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA1O95477 AP001372.4-201ENST00000524889 472 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
ABCA1O95477 AP003716.2-201ENST00000528260 108 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 AC023050.3-201ENST00000541142 333 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 MIR5697-201ENST00000578045 78 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 uc_338.16-201ENST00000621804 95 ntBASIC-0.13□□□□□ -2.43
ABCA1O95477 SNORD49B-201ENST00000365172 72 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 AL117339.3-201ENST00000418733 162 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 MTND4LP11-201ENST00000422184 280 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 HMGN2P22-201ENST00000427588 175 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 AL035398.1-201ENST00000430869 322 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.14□□□□□ -2.43
ABCA1O95477 AL592221.1-201ENST00000605266 382 ntBASIC-0.14□□□□□ -2.43
ABCA1O95477 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.14□□□□□ -2.43
ABCA1O95477 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 SNORA51.10-201ENST00000384418 136 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC079382.1-201ENST00000493346 557 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 SNORA25.12-201ENST00000516202 82 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC013828.2-201ENST00000532487 235 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC131055.1-201ENST00000584626 316 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 OR5AK4P-201ENST00000635912 903 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 RNU6-369P-201ENST00000362515 102 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC114491.1-201ENST00000416095 246 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AL117351.1-201ENST00000438864 766 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.15□□□□□ -2.43
ABCA1O95477 AC069113.3-201ENST00000521019 150 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.15□□□□□ -2.43
ABCA1O95477 MTND4LP25-201ENST00000570218 163 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC122133.1-201ENST00000613964 233 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 AC068792.1-201ENST00000621354 417 ntBASIC-0.15□□□□□ -2.43
ABCA1O95477 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
ABCA1O95477 SNORD115-8-201ENST00000363856 82 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 SNORD115-38-201ENST00000365037 82 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 RNA5SP128-201ENST00000365305 116 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 MIR1284-201ENST00000408337 120 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 SNORA40.8-201ENST00000411034 126 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 RNU6-177P-201ENST00000411257 104 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AC092809.3-201ENST00000415453 231 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AC007283.2-201ENST00000424739 197 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AL392103.1-201ENST00000447000 198 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.16□□□□□ -2.43
ABCA1O95477 RN7SKP287-201ENST00000516546 266 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AC123904.2-201ENST00000548059 300 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.16□□□□□ -2.43
ABCA1O95477 AP002360.4-201ENST00000606980 481 ntBASIC-0.16□□□□□ -2.43
ABCA1O95477 U8.7-201ENST00000364940 136 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 RNU6-424P-201ENST00000384367 105 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 RNU6-692P-201ENST00000384496 107 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.16□□□□□ -2.44
ABCA1O95477 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 MTND4P15-201ENST00000437913 1033 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 SNRPGP7-201ENST00000469016 106 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 RPS3AP17-201ENST00000472594 777 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 AL355073.2-201ENST00000612106 557 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 AC011155.2-201ENST00000623202 216 ntBASIC-0.16□□□□□ -2.44
ABCA1O95477 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms