Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.57□□□□□ -2.32
VAPBO95292 CCDC34P1-201ENST00000507441 517 ntBASIC0.57□□□□□ -2.32
VAPBO95292 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.57□□□□□ -2.32
VAPBO95292 AC004223.2-201ENST00000590309 544 ntBASIC0.57□□□□□ -2.32
VAPBO95292 U6.73-201ENST00000619194 103 ntBASIC0.57□□□□□ -2.32
VAPBO95292 OR5AK4P-201ENST00000635912 903 ntBASIC0.57□□□□□ -2.32
VAPBO95292 CASC19-280ENST00000642102 1351 ntBASIC0.57□□□□□ -2.32
VAPBO95292 Y_RNA.226-201ENST00000364337 114 ntBASIC0.56□□□□□ -2.32
VAPBO95292 SNORA2.2-201ENST00000365473 135 ntBASIC0.56□□□□□ -2.32
VAPBO95292 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
VAPBO95292 MIR487A-201ENST00000385009 80 ntBASIC0.56□□□□□ -2.32
VAPBO95292 MIR450B-201ENST00000401182 78 ntBASIC0.56□□□□□ -2.32
VAPBO95292 MIR1287-201ENST00000408492 90 ntBASIC0.56□□□□□ -2.32
VAPBO95292 MTCYBP8-201ENST00000422855 651 ntBASIC0.56□□□□□ -2.32
VAPBO95292 RNU6-917P-201ENST00000516294 104 ntBASIC0.56□□□□□ -2.32
VAPBO95292 RNU6-759P-201ENST00000516740 103 ntBASIC0.56□□□□□ -2.32
VAPBO95292 RNA5SP54-201ENST00000516951 92 ntBASIC0.56□□□□□ -2.32
VAPBO95292 SCOCP1-201ENST00000554676 349 ntBASIC0.56□□□□□ -2.32
VAPBO95292 AC009094.1-201ENST00000564443 426 ntBASIC0.56□□□□□ -2.32
VAPBO95292 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
VAPBO95292 HULC.1-201ENST00000612720 240 ntBASIC0.56□□□□□ -2.32
VAPBO95292 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VAPBO95292 RNU4-21P-201ENST00000362802 126 ntBASIC0.55□□□□□ -2.32
VAPBO95292 Y_RNA.265-201ENST00000364677 108 ntBASIC0.55□□□□□ -2.32
VAPBO95292 RNU6-245P-201ENST00000384020 107 ntBASIC0.55□□□□□ -2.32
VAPBO95292 RNU5A-2P-201ENST00000384337 116 ntBASIC0.55□□□□□ -2.32
VAPBO95292 RNU6-933P-201ENST00000384424 107 ntBASIC0.55□□□□□ -2.32
VAPBO95292 MIR521-1-201ENST00000384902 87 ntBASIC0.55□□□□□ -2.32
VAPBO95292 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.55□□□□□ -2.32
VAPBO95292 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.55□□□□□ -2.32
VAPBO95292 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
VAPBO95292 RNU6-189P-201ENST00000516120 101 ntBASIC0.55□□□□□ -2.32
VAPBO95292 MIR3913-1-201ENST00000577744 102 ntBASIC0.55□□□□□ -2.32
VAPBO95292 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
VAPBO95292 AL353765.1-201ENST00000605514 183 ntBASIC0.55□□□□□ -2.32
VAPBO95292 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.55□□□□□ -2.32
VAPBO95292 AC023934.1-201ENST00000574529 2389 ntBASIC0.55□□□□□ -2.32
VAPBO95292 RNU6-996P-201ENST00000365438 107 ntBASIC0.54□□□□□ -2.32
VAPBO95292 RNU6-1329P-201ENST00000365664 107 ntBASIC0.54□□□□□ -2.32
VAPBO95292 SNORD116-13-201ENST00000384408 92 ntBASIC0.54□□□□□ -2.32
VAPBO95292 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
VAPBO95292 RNA5SP247-201ENST00000411181 105 ntBASIC0.54□□□□□ -2.32
VAPBO95292 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.54□□□□□ -2.32
VAPBO95292 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.54□□□□□ -2.32
VAPBO95292 LINC01399-202ENST00000458450 244 ntBASIC0.54□□□□□ -2.32
VAPBO95292 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
VAPBO95292 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.54□□□□□ -2.32
VAPBO95292 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.54□□□□□ -2.32
VAPBO95292 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
VAPBO95292 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.54□□□□□ -2.32
VAPBO95292 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
VAPBO95292 AC007494.3-201ENST00000624660 743 ntBASIC0.54□□□□□ -2.32
VAPBO95292 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
VAPBO95292 AC027514.1-201ENST00000588561 1603 ntBASIC0.53□□□□□ -2.32
VAPBO95292 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
VAPBO95292 U3.8-201ENST00000363675 217 ntBASIC0.53□□□□□ -2.32
VAPBO95292 Y_RNA.224-201ENST00000364308 111 ntBASIC0.53□□□□□ -2.32
VAPBO95292 AL049545.1-201ENST00000401856 572 ntBASIC0.53□□□□□ -2.32
VAPBO95292 MTCO2P7-201ENST00000446518 666 ntBASIC0.53□□□□□ -2.32
VAPBO95292 MTND1P27-201ENST00000451117 902 ntBASIC0.53□□□□□ -2.32
VAPBO95292 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.53□□□□□ -2.32
VAPBO95292 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.53□□□□□ -2.32
VAPBO95292 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.53□□□□□ -2.32
VAPBO95292 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.53□□□□□ -2.32
VAPBO95292 AL357078.3-201ENST00000607528 618 ntBASIC0.53□□□□□ -2.32
VAPBO95292 MIR8076-201ENST00000611401 83 ntBASIC0.53□□□□□ -2.32
VAPBO95292 MIR6788-201ENST00000618842 66 ntBASIC0.53□□□□□ -2.32
VAPBO95292 Y_RNA.159-201ENST00000363674 87 ntBASIC0.52□□□□□ -2.33
VAPBO95292 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.52□□□□□ -2.33
VAPBO95292 SNORA75.2-201ENST00000391138 150 ntBASIC0.52□□□□□ -2.33
VAPBO95292 SNORA75.3-201ENST00000391231 150 ntBASIC0.52□□□□□ -2.33
VAPBO95292 MIR1185-2-201ENST00000408687 86 ntBASIC0.52□□□□□ -2.33
VAPBO95292 MIR548J-201ENST00000408833 112 ntBASIC0.52□□□□□ -2.33
VAPBO95292 MTCO2P11-201ENST00000431069 680 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL358934.1-201ENST00000432346 324 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL445305.1-201ENST00000432577 575 ntBASIC0.52□□□□□ -2.33
VAPBO95292 NDUFB4P10-201ENST00000452541 359 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.52□□□□□ -2.33
VAPBO95292 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AC022493.2-201ENST00000506122 481 ntBASIC0.52□□□□□ -2.33
VAPBO95292 SNORA70.12-201ENST00000516084 153 ntBASIC0.52□□□□□ -2.33
VAPBO95292 MTND1P5-201ENST00000517906 940 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AC060788.1-201ENST00000521318 469 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AP002001.1-203ENST00000534002 267 ntBASIC0.52□□□□□ -2.33
VAPBO95292 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.52□□□□□ -2.33
VAPBO95292 FRG2DP-202ENST00000566967 323 ntBASIC0.52□□□□□ -2.33
VAPBO95292 MIR4438-201ENST00000585271 93 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AC010620.1-201ENST00000601088 1102 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL136370.1-201ENST00000608166 691 ntBASIC0.52□□□□□ -2.33
VAPBO95292 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.52□□□□□ -2.33
VAPBO95292 AC005609.4-201ENST00000625071 447 ntBASIC0.52□□□□□ -2.33
VAPBO95292 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
VAPBO95292 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
VAPBO95292 MT-TH-201ENST00000387441 69 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.51□□□□□ -2.33
VAPBO95292 CALM2P4-201ENST00000430810 426 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AL035398.1-201ENST00000430869 322 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AC073415.1-201ENST00000449240 153 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AC245047.8-201ENST00000456455 284 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms