Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 MTCYBP9-201ENST00000431021 303 ntBASIC2.56□□□□□ -2
SNX2O60749 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
SNX2O60749 RNU7-14P-201ENST00000459331 62 ntBASIC2.56□□□□□ -2
SNX2O60749 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
SNX2O60749 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.56□□□□□ -2
SNX2O60749 MTCO2P24-201ENST00000515611 426 ntBASIC2.56□□□□□ -2
SNX2O60749 AC055872.1-201ENST00000570978 278 ntBASIC2.56□□□□□ -2
SNX2O60749 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
SNX2O60749 Y_RNA.772-201ENST00000606692 102 ntBASIC2.56□□□□□ -2
SNX2O60749 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
SNX2O60749 IGHVIII-44-202ENST00000636235 289 ntBASIC2.56□□□□□ -2
SNX2O60749 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.56□□□□□ -2
SNX2O60749 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
SNX2O60749 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNX2O60749 Y_RNA.176-201ENST00000363815 109 ntBASIC2.55□□□□□ -2
SNX2O60749 Y_RNA.183-201ENST00000363882 113 ntBASIC2.55□□□□□ -2
SNX2O60749 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
SNX2O60749 Y_RNA.276-201ENST00000364732 109 ntBASIC2.55□□□□□ -2
SNX2O60749 RNU6-937P-201ENST00000384325 106 ntBASIC2.55□□□□□ -2
SNX2O60749 MIR29C-201ENST00000385231 88 ntBASIC2.55□□□□□ -2
SNX2O60749 MRPL35P1-201ENST00000404272 572 ntBASIC2.55□□□□□ -2
SNX2O60749 UQCRBP2-201ENST00000447827 297 ntBASIC2.55□□□□□ -2
SNX2O60749 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.55□□□□□ -2
SNX2O60749 LINC01399-202ENST00000458450 244 ntBASIC2.55□□□□□ -2
SNX2O60749 AC098869.1-201ENST00000481627 292 ntBASIC2.55□□□□□ -2
SNX2O60749 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
SNX2O60749 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
SNX2O60749 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
SNX2O60749 SNORA40.15-201ENST00000516884 107 ntBASIC2.55□□□□□ -2
SNX2O60749 AP002001.1-203ENST00000534002 267 ntBASIC2.55□□□□□ -2
SNX2O60749 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
SNX2O60749 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
SNX2O60749 AC018448.1-201ENST00000552843 316 ntBASIC2.55□□□□□ -2
SNX2O60749 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SNX2O60749 AC233702.2-202ENST00000562547 291 ntBASIC2.55□□□□□ -2
SNX2O60749 MIR4513-201ENST00000581077 86 ntBASIC2.55□□□□□ -2
SNX2O60749 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
SNX2O60749 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.55□□□□□ -2
SNX2O60749 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.55□□□□□ -2
SNX2O60749 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
SNX2O60749 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SNX2O60749 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNX2O60749 RNU6-626P-201ENST00000363354 107 ntBASIC2.54□□□□□ -2
SNX2O60749 Y_RNA.144-201ENST00000363521 113 ntBASIC2.54□□□□□ -2
SNX2O60749 Y_RNA.149-201ENST00000363558 117 ntBASIC2.54□□□□□ -2
SNX2O60749 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
SNX2O60749 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
SNX2O60749 HMGN2P18-201ENST00000450680 270 ntBASIC2.54□□□□□ -2
SNX2O60749 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.54□□□□□ -2
SNX2O60749 RNU2-19P-201ENST00000517288 84 ntBASIC2.54□□□□□ -2
SNX2O60749 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.54□□□□□ -2
SNX2O60749 MIR5694-201ENST00000581190 76 ntBASIC2.54□□□□□ -2
SNX2O60749 RPL17P51-201ENST00000605218 238 ntBASIC2.54□□□□□ -2
SNX2O60749 SNORD11B-201ENST00000607707 90 ntBASIC2.54□□□□□ -2
SNX2O60749 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.54□□□□□ -2
SNX2O60749 AC130454.1-201ENST00000622948 401 ntBASIC2.54□□□□□ -2
SNX2O60749 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
SNX2O60749 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
SNX2O60749 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNX2O60749 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SNX2O60749 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
SNX2O60749 RNU6-20P-201ENST00000384106 107 ntBASIC2.53□□□□□ -2
SNX2O60749 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
SNX2O60749 RPL21P38-201ENST00000418090 167 ntBASIC2.53□□□□□ -2
SNX2O60749 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.53□□□□□ -2
SNX2O60749 AC005002.2-201ENST00000438228 269 ntBASIC2.53□□□□□ -2
SNX2O60749 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.53□□□□□ -2
SNX2O60749 RNU6-625P-201ENST00000459412 107 ntBASIC2.53□□□□□ -2
SNX2O60749 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
SNX2O60749 AC074133.1-201ENST00000515696 183 ntBASIC2.53□□□□□ -2
SNX2O60749 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.53□□□□□ -2
SNX2O60749 MIR4503-201ENST00000582187 83 ntBASIC2.53□□□□□ -2
SNX2O60749 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNX2O60749 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNX2O60749 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SNX2O60749 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNX2O60749 RNU6-1305P-201ENST00000364353 104 ntBASIC2.52□□□□□ -2.01
SNX2O60749 Y_RNA.498-201ENST00000384460 102 ntBASIC2.52□□□□□ -2.01
SNX2O60749 SNORA11.2-201ENST00000408318 127 ntBASIC2.52□□□□□ -2.01
SNX2O60749 RN7SKP284-201ENST00000411002 343 ntBASIC2.52□□□□□ -2.01
SNX2O60749 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.52□□□□□ -2.01
SNX2O60749 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.52□□□□□ -2.01
SNX2O60749 AL731563.1-201ENST00000442202 214 ntBASIC2.52□□□□□ -2.01
SNX2O60749 AC055731.1-201ENST00000474387 401 ntBASIC2.52□□□□□ -2.01
SNX2O60749 CYCSP23-201ENST00000519781 313 ntBASIC2.52□□□□□ -2.01
SNX2O60749 MIR4300-201ENST00000581016 96 ntBASIC2.52□□□□□ -2.01
SNX2O60749 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNX2O60749 RNU4-82P-201ENST00000362443 140 ntBASIC2.51□□□□□ -2.01
SNX2O60749 RNU6-463P-201ENST00000384340 107 ntBASIC2.51□□□□□ -2.01
SNX2O60749 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
SNX2O60749 MIR215-201ENST00000384858 110 ntBASIC2.51□□□□□ -2.01
SNX2O60749 MIR548B-201ENST00000385247 97 ntBASIC2.51□□□□□ -2.01
SNX2O60749 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SNX2O60749 SNORD115-46-201ENST00000390982 71 ntBASIC2.51□□□□□ -2.01
SNX2O60749 RAB28P5-201ENST00000427490 651 ntBASIC2.51□□□□□ -2.01
SNX2O60749 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX2O60749 HMGN2P9-201ENST00000476875 229 ntBASIC2.51□□□□□ -2.01
SNX2O60749 RNU6-966P-201ENST00000516479 104 ntBASIC2.51□□□□□ -2.01
SNX2O60749 RNU6-107P-201ENST00000516643 102 ntBASIC2.51□□□□□ -2.01
SNX2O60749 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms