Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
KDM1AO60341 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 RNU6-1266P-201ENST00000362794 105 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 Y_RNA.136-201ENST00000363444 102 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 RNU1-138P-201ENST00000384093 164 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 RNU6-514P-201ENST00000384208 107 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KDM1AO60341 SUMO1P4-201ENST00000429430 302 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 S100A11P2-201ENST00000467589 312 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 RNU6-794P-201ENST00000517261 64 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.87□□□□□ -1.95
KDM1AO60341 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KDM1AO60341 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 AL049779.4-201ENST00000604500 156 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.87□□□□□ -1.95
KDM1AO60341 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
KDM1AO60341 AC135776.4-201ENST00000624300 1904 ntBASIC2.87□□□□□ -1.95
KDM1AO60341 Y_RNA.20-201ENST00000362479 113 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 RNU6-438P-201ENST00000365561 103 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 Y_RNA.418-201ENST00000384029 102 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 MIR561-201ENST00000385216 97 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 AL603910.2-201ENST00000407268 136 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 HMGN2P18-201ENST00000450680 270 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.86□□□□□ -1.95
KDM1AO60341 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.86□□□□□ -1.95
KDM1AO60341 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.86□□□□□ -1.95
KDM1AO60341 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.86□□□□□ -1.95
KDM1AO60341 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
KDM1AO60341 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
KDM1AO60341 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
KDM1AO60341 SNORD27-201ENST00000363981 72 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 Y_RNA.552-201ENST00000384665 112 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 MIR1185-2-201ENST00000408687 86 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 RNU2-48P-201ENST00000410694 191 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 RNU7-57P-201ENST00000459540 60 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
KDM1AO60341 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.85□□□□□ -1.95
KDM1AO60341 PRELID2P1-201ENST00000552837 301 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 MIR4446-201ENST00000578505 67 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 AC010900.2-201ENST00000604508 210 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 AC078938.1-201ENST00000620993 318 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
KDM1AO60341 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
KDM1AO60341 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KDM1AO60341 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.85□□□□□ -1.95
KDM1AO60341 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KDM1AO60341 Y_RNA.44-201ENST00000362676 108 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 Y_RNA.54-201ENST00000362766 105 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 SNORD115-30-201ENST00000364117 82 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 RNU6-743P-201ENST00000364151 106 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 RNU6-975P-201ENST00000384296 105 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.84□□□□□ -1.95
KDM1AO60341 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.84□□□□□ -1.95
KDM1AO60341 MTCO1P5-201ENST00000433573 344 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.84□□□□□ -1.95
KDM1AO60341 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.84□□□□□ -1.95
KDM1AO60341 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.84□□□□□ -1.95
KDM1AO60341 MIR3668-201ENST00000582138 75 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 AC005000.2-201ENST00000605468 310 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 U4atac.1-201ENST00000618345 95 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 snoZ196.1-201ENST00000625269 89 ntBASIC2.84□□□□□ -1.95
KDM1AO60341 AC009487.4-201ENST00000624969 3585 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 Y_RNA.257-201ENST00000364596 102 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 U3.40-201ENST00000408706 208 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 Z92545.1-201ENST00000411782 234 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AC091959.1-201ENST00000495857 238 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.83□□□□□ -1.96
KDM1AO60341 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 RNU6-667P-201ENST00000517186 102 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.83□□□□□ -1.96
KDM1AO60341 BX284668.6-201ENST00000606899 438 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 AC091953.5-201ENST00000622919 233 ntBASIC2.83□□□□□ -1.96
KDM1AO60341 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
KDM1AO60341 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KDM1AO60341 RNU6-525P-201ENST00000363685 104 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 RNU6-324P-201ENST00000363957 106 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 Y_RNA.277-201ENST00000364754 102 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 Y_RNA.539-201ENST00000384635 107 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 MIR128-1-201ENST00000384921 82 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 MIR592-201ENST00000384959 97 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 AL031003.1-201ENST00000404229 172 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.82□□□□□ -1.96
KDM1AO60341 RNU6-991P-201ENST00000516168 107 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 RNU6-111P-201ENST00000517179 105 ntBASIC2.82□□□□□ -1.96
KDM1AO60341 MIR3684-201ENST00000579779 74 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms