Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SNORD14A-201ENST00000606526 91 ntBASIC2.68□□□□□ -1.98
PRPF3O43395 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.68□□□□□ -1.98
PRPF3O43395 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.68□□□□□ -1.98
PRPF3O43395 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.68□□□□□ -1.98
PRPF3O43395 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF3O43395 AC131280.1-202ENST00000624067 4211 ntBASIC2.68□□□□□ -1.98
PRPF3O43395 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF3O43395 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PRPF3O43395 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PRPF3O43395 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
PRPF3O43395 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 RNU6-1264P-201ENST00000383891 107 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 Y_RNA.389-201ENST00000383924 113 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 SNORA51.11-201ENST00000384442 131 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 MIR1261-201ENST00000408659 82 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF3O43395 UBL5P3-201ENST00000475112 231 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.67□□□□□ -1.98
PRPF3O43395 AC124312.5-201ENST00000604451 268 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF3O43395 AL162373.1-201ENST00000620433 407 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.67□□□□□ -1.98
PRPF3O43395 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
PRPF3O43395 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF3O43395 Y_RNA.527-201ENST00000384573 102 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 MIR606-201ENST00000384851 96 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 HMGN2P39-201ENST00000398005 273 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 MIR1262-201ENST00000408276 93 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 RNU6-101P-201ENST00000410323 104 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 SNORD12B-201ENST00000410433 91 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.66□□□□□ -1.98
PRPF3O43395 MTCO1P44-201ENST00000441935 243 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.66□□□□□ -1.98
PRPF3O43395 RNU1-117P-201ENST00000517041 158 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 RNU6-1137P-201ENST00000517073 99 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 AC022616.4-201ENST00000522985 181 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.66□□□□□ -1.98
PRPF3O43395 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 MIR6766-201ENST00000622641 72 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 snoZ196.1-201ENST00000625269 89 ntBASIC2.66□□□□□ -1.98
PRPF3O43395 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF3O43395 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.65□□□□□ -1.98
PRPF3O43395 RNU1-58P-201ENST00000362413 163 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNU6-450P-201ENST00000364654 107 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNU6-1160P-201ENST00000384546 104 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 SNORA80E-201ENST00000384744 137 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 AL353689.1-201ENST00000438895 199 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 SUMO1P2-201ENST00000452524 304 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNU7-57P-201ENST00000459540 60 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 TRBV12-1-201ENST00000479785 344 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 YWHAEP4-201ENST00000505390 198 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNU6-1146P-201ENST00000516282 102 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNA5SP281-201ENST00000516504 135 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 RNU6-856P-201ENST00000516959 98 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 AL390123.1-201ENST00000603216 237 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 AL121655.1-201ENST00000605811 308 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 AC010205.1-201ENST00000616668 449 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 U6.92-201ENST00000636464 89 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.65□□□□□ -1.99
PRPF3O43395 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRPF3O43395 Y_RNA.415-201ENST00000384012 112 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 RNU6-926P-201ENST00000384075 107 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 Y_RNA.455-201ENST00000384230 98 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 Y_RNA.498-201ENST00000384460 102 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 RNU6-823P-201ENST00000391042 103 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 AL118496.2-201ENST00000448300 230 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 RNU6-221P-201ENST00000459541 99 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 AC010469.2-201ENST00000496412 480 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 RNU6-1012P-201ENST00000516606 109 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 AL357075.2-201ENST00000614906 189 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRPF3O43395 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.64□□□□□ -1.99
PRPF3O43395 AC008555.8-201ENST00000623602 2168 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PRPF3O43395 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PRPF3O43395 RNU6-1266P-201ENST00000362794 105 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 SNORD87-201ENST00000364849 89 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 SNORA70B-201ENST00000384210 135 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 RNU6-985P-201ENST00000410182 104 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 RNA5SP504-201ENST00000410676 117 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF3O43395 AC010531.2-201ENST00000465012 153 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 SNORA40.9-201ENST00000515895 93 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.63□□□□□ -1.99
PRPF3O43395 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF3O43395 Y_RNA.772-201ENST00000606692 102 ntBASIC2.63□□□□□ -1.99
PRPF3O43395 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF3O43395 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF3O43395 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRPF3O43395 Y_RNA.162-201ENST00000363683 102 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 SNORA3A-201ENST00000364113 130 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 Y_RNA.230-201ENST00000364348 109 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms