Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BET1P1-201ENST00000482276 359 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.72□□□□□ -2.29
UPK1AO00322 AC091885.1-201ENST00000506658 268 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 RNU6-1198P-201ENST00000516904 67 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 MTND1P5-201ENST00000517906 940 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.72□□□□□ -2.29
UPK1AO00322 AL162424.1-201ENST00000602325 221 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AC092807.2-201ENST00000609367 243 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AL158063.1-201ENST00000615349 536 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AC073349.3-201ENST00000617616 186 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 U6.108-201ENST00000637764 58 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UPK1AO00322 OR4G1P-203ENST00000641984 1631 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 RNU6-505P-201ENST00000384427 107 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 RNU6-790P-201ENST00000384479 105 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 EIF4E2P1-201ENST00000393781 255 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AL590002.1-201ENST00000406554 418 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.71□□□□□ -2.3
UPK1AO00322 RNU6-261P-201ENST00000459506 102 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 RNU7-94P-201ENST00000459576 63 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 RNU6-1208P-201ENST00000459588 107 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.71□□□□□ -2.3
UPK1AO00322 AC105758.1-201ENST00000506038 399 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 SNORA25.14-201ENST00000516481 132 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 SCARNA16.2-201ENST00000516520 172 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC026371.1-201ENST00000551867 419 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC004584.2-201ENST00000570407 410 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 CPDP1-201ENST00000579660 283 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC100830.2-201ENST00000581636 240 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC022432.1-201ENST00000595739 310 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 GHRLOS.1-201ENST00000610995 70 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC073534.2-201ENST00000620377 381 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 AC018630.2-201ENST00000534866 2403 ntBASIC0.71□□□□□ -2.3
UPK1AO00322 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
UPK1AO00322 RNU4-79P-201ENST00000362764 141 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 MIR32-201ENST00000384965 70 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 MIR1276-201ENST00000408707 83 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.7□□□□□ -2.3
UPK1AO00322 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK1AO00322 RNU6-947P-201ENST00000516264 106 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 AC016957.1-201ENST00000534895 309 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 MIR5695-201ENST00000579717 85 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 AC068790.6-201ENST00000602558 258 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 AL390123.1-201ENST00000603216 237 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
UPK1AO00322 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
UPK1AO00322 RNU6-1322P-201ENST00000364309 107 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 SNORD87-201ENST00000364849 89 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 SNORA69-201ENST00000383895 132 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 RNU6-541P-201ENST00000384709 110 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 MIR660-201ENST00000385235 97 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.69□□□□□ -2.3
UPK1AO00322 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.69□□□□□ -2.3
UPK1AO00322 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC048334.1-201ENST00000477975 159 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 RNU7-99P-201ENST00000516271 62 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 Y_RNA.717-201ENST00000517106 92 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.69□□□□□ -2.3
UPK1AO00322 MIR4778-201ENST00000577635 80 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK1AO00322 AC136443.5-201ENST00000603741 370 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC121247.2-201ENST00000604776 136 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 SNORA28-201ENST00000606769 126 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AL133215.3-201ENST00000609801 448 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 U6.73-201ENST00000619194 103 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 AC006504.8-201ENST00000621046 635 ntBASIC0.69□□□□□ -2.3
UPK1AO00322 RNU6-199P-201ENST00000362954 107 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 U3.8-201ENST00000363675 217 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 RNU4-9P-201ENST00000364951 139 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 RNU4-20P-201ENST00000365601 151 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 SNORA75-201ENST00000384158 137 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 RNA5SP504-201ENST00000410676 117 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.68□□□□□ -2.3
UPK1AO00322 MTND3P16-201ENST00000452205 344 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 NDUFB4P10-201ENST00000452541 359 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 AC083798.1-201ENST00000472671 131 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 APOOP3-201ENST00000536787 586 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.68□□□□□ -2.3
UPK1AO00322 AC008088.1-201ENST00000580993 280 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 AP001330.5-201ENST00000607176 411 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.68□□□□□ -2.3
UPK1AO00322 AP000568.1-201ENST00000282964 442 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 SNORD114-24-201ENST00000365029 72 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 Y_RNA.319-201ENST00000365138 92 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 Y_RNA.481-201ENST00000384373 102 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 AL451046.2-201ENST00000403074 277 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 MIR1185-2-201ENST00000408687 86 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 STAG3L5P-204ENST00000443759 179 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 RPS4XP11-201ENST00000446897 772 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 RPL39P39-201ENST00000455840 151 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms