Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SCARNA16.2-201ENST00000516520 172 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-856P-201ENST00000516959 98 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 APOOP3-201ENST00000536787 586 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AC008873.1-201ENST00000625051 138 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AL669831.3-213ENST00000636676 183 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU1-62P-201ENST00000362599 164 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-1188P-201ENST00000363795 107 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-281P-201ENST00000384212 103 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-541P-201ENST00000384709 110 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU1-139P-201ENST00000391307 165 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR320B2-201ENST00000408479 138 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC099677.2-201ENST00000436385 175 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC016717.1-201ENST00000448918 286 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-1053P-201ENST00000515930 101 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-875P-201ENST00000516488 106 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR4753-201ENST00000585119 83 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC005786.1-201ENST00000588553 154 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 CYP2C61P-201ENST00000604072 290 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC113139.1-201ENST00000605049 239 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 snoU13.31-201ENST00000607291 104 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AC100812.1-201ENST00000607622 580 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 PISRT1.1-201ENST00000616930 107 ntBASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NEDD8-MDP1E9PL57 AL159152.1-201ENST00000635019 2587 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-222P-201ENST00000362438 107 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-310P-201ENST00000384655 107 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR190B-201ENST00000401119 79 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AL117342.1-201ENST00000404861 406 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 Y_RNA.646-201ENST00000410980 101 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-370P-201ENST00000411008 104 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-1304P-201ENST00000411374 106 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AL353997.1-201ENST00000432936 108 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC091179.3-201ENST00000474761 144 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC097473.1-201ENST00000508142 408 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-120P-201ENST00000516077 103 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-948P-201ENST00000516374 107 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC005899.2-201ENST00000584353 90 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORD11B-201ENST00000607707 90 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AL132765.2-201ENST00000610812 351 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 U1.36-201ENST00000620684 176 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AC092794.2-201ENST00000620933 563 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 AL359697.1-201ENST00000624879 587 ntBASIC1.63□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-280P-201ENST00000364145 104 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-1305P-201ENST00000364353 104 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR548B-201ENST00000385247 97 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNA5SP212-201ENST00000391223 107 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 MTCYBP10-201ENST00000424905 650 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 FGF7P4-201ENST00000509595 295 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-507P-201ENST00000516045 100 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU2-34P-201ENST00000516534 121 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 Y_RNA.706-201ENST00000516933 99 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 MIR548S-201ENST00000581352 82 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AC010900.2-201ENST00000604508 210 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 AC068205.3-201ENST00000636385 468 ntBASIC1.62□□□□□ -2.15
NEDD8-MDP1E9PL57 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 MTND5P16-201ENST00000460269 1703 ntBASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 RNU6-60P-201ENST00000364792 103 ntBASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORD87-201ENST00000364849 89 ntBASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORA75.6-201ENST00000391318 127 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms