Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.73□□□□□ -2.13
SRRM4A7MD48 HSBP1P1-201ENST00000555205 166 ntBASIC1.73□□□□□ -2.13
SRRM4A7MD48 AC104695.3-201ENST00000604052 296 ntBASIC1.73□□□□□ -2.13
SRRM4A7MD48 AC100812.1-201ENST00000607622 580 ntBASIC1.73□□□□□ -2.13
SRRM4A7MD48 AC087588.2-201ENST00000617667 426 ntBASIC1.73□□□□□ -2.13
SRRM4A7MD48 AC138305.3-201ENST00000624988 240 ntBASIC1.73□□□□□ -2.13
SRRM4A7MD48 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.73□□□□□ -2.13
SRRM4A7MD48 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SRRM4A7MD48 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU6-1309P-201ENST00000363305 108 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU6-450P-201ENST00000364654 107 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 MIR586-201ENST00000385035 97 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 SNORA12.2-201ENST00000391040 156 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 SNORA11.4-201ENST00000408823 129 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU4-53P-201ENST00000410828 140 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SRRM4A7MD48 AL358176.2-201ENST00000425769 204 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.72□□□□□ -2.13
SRRM4A7MD48 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 MTND3P2-201ENST00000438452 342 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RPL23AP6-201ENST00000446637 472 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 MTATP8P1-201ENST00000467115 207 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU6-475P-201ENST00000516073 104 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 SCARNA16.3-201ENST00000516595 184 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 Y_RNA.706-201ENST00000516933 99 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU7-4P-201ENST00000516961 62 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 RNU6-58P-201ENST00000517143 103 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 MIR5188-201ENST00000583467 113 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 ZNF204P-201ENST00000416749 2397 ntBASIC1.72□□□□□ -2.13
SRRM4A7MD48 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SRRM4A7MD48 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.71□□□□□ -2.13
SRRM4A7MD48 MTND5P16-201ENST00000460269 1703 ntBASIC1.71□□□□□ -2.13
SRRM4A7MD48 Y_RNA.153-201ENST00000363615 91 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 SNORA16B-201ENST00000364674 135 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.389-201ENST00000383924 113 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.405-201ENST00000383979 100 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.451-201ENST00000384200 100 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.455-201ENST00000384230 98 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 RNU6-301P-201ENST00000384277 107 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.524-201ENST00000384564 100 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.561-201ENST00000384694 100 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 RNU6-1105P-201ENST00000384774 107 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 Y_RNA.605-201ENST00000410577 105 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AC139712.2-201ENST00000424302 339 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.71□□□□□ -2.14
SRRM4A7MD48 MTCO3P8-201ENST00000453691 755 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 MRPS17P9-201ENST00000511924 393 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 RPL23AP94-201ENST00000512518 302 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 MIR514B-201ENST00000516774 80 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.71□□□□□ -2.14
SRRM4A7MD48 RRN3P3-201ENST00000549207 578 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.71□□□□□ -2.14
SRRM4A7MD48 AC006600.1-201ENST00000572529 153 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 MIR3169-201ENST00000578032 83 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AC113195.1-201ENST00000579952 141 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AC010928.2-201ENST00000588017 287 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
SRRM4A7MD48 AL773524.1-201ENST00000614065 229 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 MIR6132-201ENST00000622083 109 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 AL078596.1-201ENST00000624856 447 ntBASIC1.71□□□□□ -2.14
SRRM4A7MD48 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 Y_RNA.133-201ENST00000363428 110 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 SNORA69.1-201ENST00000390904 137 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 RNU6-823P-201ENST00000391042 103 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AL356379.1-201ENST00000414105 126 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AC096920.1-201ENST00000423991 241 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 MTCO1P44-201ENST00000441935 243 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 YWHAEP4-201ENST00000505390 198 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 SNORA40.14-201ENST00000516543 86 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 CYCSP23-201ENST00000519781 313 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AC144568.1-201ENST00000520139 137 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 AL117187.1-201ENST00000555482 181 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 VN1R91P-201ENST00000594377 169 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 SNORD11B-201ENST00000607707 90 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 AC005296.1-201ENST00000616145 209 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AL590240.4-201ENST00000616908 390 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AL138825.1-201ENST00000618587 192 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
SRRM4A7MD48 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SRRM4A7MD48 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SRRM4A7MD48 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SRRM4A7MD48 AL596028.1-201ENST00000326971 197 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU4-82P-201ENST00000362443 140 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 Y_RNA.106-201ENST00000363189 100 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 Y_RNA.144-201ENST00000363521 113 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNA5SP160-201ENST00000364866 120 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 Y_RNA.424-201ENST00000384063 103 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 RNU6-1235P-201ENST00000384559 107 ntBASIC1.69□□□□□ -2.14
SRRM4A7MD48 SNORA8-201ENST00000384574 139 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms