Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC78A2IDD5 AC105245.1-201ENST00000581934 244 ntBASIC2.8□□□□□ -1.96
CCDC78A2IDD5 MIR4282-201ENST00000583613 67 ntBASIC2.8□□□□□ -1.96
CCDC78A2IDD5 AL670379.2-201ENST00000604983 252 ntBASIC2.8□□□□□ -1.96
CCDC78A2IDD5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.8□□□□□ -1.96
CCDC78A2IDD5 AC068205.3-201ENST00000636385 468 ntBASIC2.8□□□□□ -1.96
CCDC78A2IDD5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 Y_RNA.83-201ENST00000363005 113 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 Y_RNA.297-201ENST00000364950 91 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 Y_RNA.446-201ENST00000384178 104 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 U6atac.2-201ENST00000408644 118 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC104389.3-201ENST00000445629 235 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 MIR3684-201ENST00000579779 74 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AL109918.3-201ENST00000603072 338 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 Z83818.1-201ENST00000603584 150 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC006380.1-201ENST00000603598 186 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC006023.1-201ENST00000603944 259 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC78A2IDD5 AC096644.4-201ENST00000563417 2912 ntBASIC2.79□□□□□ -1.96
CCDC78A2IDD5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AL603908.1-201ENST00000406098 201 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC024067.1-201ENST00000426199 223 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC027124.2-201ENST00000428249 105 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 TOMM22P2-201ENST00000430735 237 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 MTND5P15-201ENST00000434246 349 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC004386.2-201ENST00000441858 148 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 SUMO1P2-201ENST00000452524 304 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC091959.1-201ENST00000495857 238 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 MIR4643-201ENST00000577473 78 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 MIR5006-201ENST00000583027 110 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 MIR4672-201ENST00000583126 81 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AL512605.2-201ENST00000592972 256 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC004467.1-201ENST00000615678 330 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 FTX_2.1-201ENST00000618816 94 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 AC008873.1-201ENST00000625051 138 ntBASIC2.78□□□□□ -1.96
CCDC78A2IDD5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC78A2IDD5 Y_RNA.122-201ENST00000363331 96 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 U3.8-201ENST00000363675 217 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.199-201ENST00000364014 102 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 SNORD32B-201ENST00000364460 84 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RNU2-61P-201ENST00000411069 191 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AC009963.1-201ENST00000417265 157 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 PIGPP3-201ENST00000425307 415 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AC080013.2-201ENST00000460866 323 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RNA5SP356-201ENST00000515972 94 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RNU2-44P-201ENST00000516795 194 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC78A2IDD5 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 GTF3AP2-201ENST00000557014 266 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC78A2IDD5 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.274-201ENST00000364714 101 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 RNU6-740P-201ENST00000364734 105 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 RNY4P28-201ENST00000365281 93 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.418-201ENST00000384029 102 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.590-201ENST00000410140 107 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.644-201ENST00000459006 113 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 AC140059.1-201ENST00000489238 361 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.674-201ENST00000516362 113 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 RNU2-12P-201ENST00000517216 168 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 AC004792.1-201ENST00000614523 137 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 AC091932.3-201ENST00000624223 323 ntBASIC2.76□□□□□ -1.97
CCDC78A2IDD5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC78A2IDD5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 MIR411-201ENST00000362239 96 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.101-201ENST00000363154 102 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 Y_RNA.180-201ENST00000363867 113 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 SNORA18.2-201ENST00000383865 132 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 RNU6-1062P-201ENST00000383908 107 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 SNORA67.2-201ENST00000384300 149 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
CCDC78A2IDD5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC78A2IDD5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms