Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RPS29P15-201ENST00000458329 171 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 LINC01399-202ENST00000458450 244 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU7-167P-201ENST00000459160 62 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-1110P-201ENST00000516462 101 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC022868.1-201ENST00000517767 391 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 MTND4LP26-201ENST00000518144 282 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC131055.1-201ENST00000584626 316 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-85P-201ENST00000605989 107 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 MTND5P16-201ENST00000460269 1703 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR1-2-201ENST00000384961 85 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 U8.16-201ENST00000391279 133 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-1186P-201ENST00000410429 97 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP494-201ENST00000410653 129 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 CALM2P4-201ENST00000430810 426 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AC005534.2-201ENST00000431047 433 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AL162725.1-201ENST00000435405 301 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 DAP3P1-201ENST00000441522 278 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 MTCO1P19-201ENST00000443487 500 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 NDUFB4P10-201ENST00000452541 359 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 TPT1P7-201ENST00000458300 517 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 SNORA68.3-201ENST00000515906 83 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 SUB1P2-201ENST00000556401 297 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AC005730.3-201ENST00000583067 366 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
TRAV1-1A0A0B4J248 MTND4P4-201ENST00000439033 1366 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR7-2-201ENST00000384970 110 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR513B-201ENST00000385136 84 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR1185-2-201ENST00000408687 86 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 MTCYBP10-201ENST00000424905 650 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 UBE2D3P4-201ENST00000441973 436 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 STAG3L5P-204ENST00000443759 179 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 USP9YP29-201ENST00000445112 563 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-1037P-201ENST00000459571 107 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 OR9P1P-201ENST00000496431 281 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 UBE2V1P12-201ENST00000503954 474 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 FRG2DP-202ENST00000566967 323 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 FGF7P1-201ENST00000582820 288 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR3192-201ENST00000584920 77 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 Z83818.1-201ENST00000603584 150 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC092354.1-201ENST00000606057 376 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC006566.1-201ENST00000608943 513 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC068792.1-201ENST00000621354 417 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 SCARNA4-201ENST00000629045 128 ntBASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.19□□□□□ -2.38
TRAV1-1A0A0B4J248 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP264-201ENST00000363115 107 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-1067P-201ENST00000384752 107 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP193-201ENST00000410353 107 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP511-201ENST00000410487 115 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AC004854.1-201ENST00000440356 349 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 RPL39P5-202ENST00000512505 151 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AC087854.1-201ENST00000519706 414 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AC109810.1-201ENST00000534066 224 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR3682-201ENST00000581338 84 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AP000240.1-201ENST00000609910 452 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AL138726.1-201ENST00000614873 333 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
TRAV1-1A0A0B4J248 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 MIRLET7C-201ENST00000362160 84 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU4-41P-201ENST00000364426 143 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU2-29P-201ENST00000410423 189 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 SSR1P2-201ENST00000415208 787 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 MRPS18CP6-201ENST00000423587 223 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AC093019.1-201ENST00000443135 252 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AC093850.1-201ENST00000454121 251 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AF186996.7-201ENST00000492781 209 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AC105417.1-201ENST00000514691 285 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU7-28P-201ENST00000516759 62 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AL137161.1-201ENST00000532231 390 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AL117336.2-201ENST00000602435 335 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AL022161.1-201ENST00000604390 213 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms