Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 AC018470.1-201ENST00000624790 3129 ntBASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 BICD1-207ENST00000551848 1962 ntBASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 TSPY21P-201ENST00000433481 731 ntBASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 AC008687.6-201ENST00000596318 630 ntBASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.31■□□□□ 0.2
MRPS28Q9Y2Q9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
MRPS28Q9Y2Q9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 AL354751.1-201ENST00000412768 1863 ntBASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 LETM1P2-201ENST00000597330 2178 ntBASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 NCF1B-203ENST00000435988 1254 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms