Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.3■□□□□ 0.2
COLCA1Q6ZS62 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 MTMR9LP-203ENST00000426597 1545 ntBASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COLCA1Q6ZS62 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 KRT17P2-201ENST00000300992 1314 ntBASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 UNC93B2-201ENST00000285383 730 ntBASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 SNORA78-201ENST00000459373 127 ntBASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 MIR4497-201ENST00000583208 89 ntBASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.28■□□□□ 0.2
COLCA1Q6ZS62 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 CRYGFP-201ENST00000418459 633 ntBASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.27■□□□□ 0.2
COLCA1Q6ZS62 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 ANO7L1-203ENST00000602586 1720 ntBASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 AC079598.2-202ENST00000546624 1451 ntBASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms