Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA3P29320 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA3P29320 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 AC091874.3-201ENST00000512672 1195 ntBASIC18.43■□□□□ 0.54
EPHA3P29320 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHA3P29320 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA3P29320 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
EPHA3P29320 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHA3P29320 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHA3P29320 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.42■□□□□ 0.54
EPHA3P29320 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
EPHA3P29320 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
EPHA3P29320 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHA3P29320 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHA3P29320 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHA3P29320 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHA3P29320 AC092437.1-201ENST00000624794 1048 ntBASIC18.42■□□□□ 0.54
EPHA3P29320 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
EPHA3P29320 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
EPHA3P29320 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 AC092368.3-202ENST00000574180 1591 ntBASIC18.42■□□□□ 0.54
EPHA3P29320 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
EPHA3P29320 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHA3P29320 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA3P29320 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EPHA3P29320 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHA3P29320 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.41■□□□□ 0.54
EPHA3P29320 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 AC073592.3-201ENST00000625118 1834 ntBASIC18.41■□□□□ 0.54
EPHA3P29320 AC090340.1-201ENST00000620778 4980 ntBASIC18.41■□□□□ 0.54
EPHA3P29320 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
EPHA3P29320 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
EPHA3P29320 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHA3P29320 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHA3P29320 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
EPHA3P29320 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
EPHA3P29320 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EPHA3P29320 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
EPHA3P29320 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
EPHA3P29320 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.4■□□□□ 0.54
EPHA3P29320 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.4■□□□□ 0.54
EPHA3P29320 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.4■□□□□ 0.54
EPHA3P29320 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.4■□□□□ 0.54
EPHA3P29320 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.4■□□□□ 0.54
EPHA3P29320 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.4■□□□□ 0.54
EPHA3P29320 AC092118.2-201ENST00000613495 667 ntBASIC18.4■□□□□ 0.54
EPHA3P29320 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.4■□□□□ 0.54
EPHA3P29320 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.4■□□□□ 0.54
EPHA3P29320 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.4■□□□□ 0.54
EPHA3P29320 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EPHA3P29320 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
EPHA3P29320 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
EPHA3P29320 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
EPHA3P29320 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms