Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.74■■□□□ 1.07
CAPN2P17655 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CAPN2P17655 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.74■■□□□ 1.07
CAPN2P17655 AC004263.2-201ENST00000617183 678 ntBASIC21.74■■□□□ 1.07
CAPN2P17655 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPN2P17655 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN2P17655 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 KRT8P45-201ENST00000414328 1447 ntBASIC21.73■■□□□ 1.07
CAPN2P17655 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CAPN2P17655 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CAPN2P17655 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CAPN2P17655 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 AP000593.1-201ENST00000393668 712 ntBASIC21.73■■□□□ 1.07
CAPN2P17655 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPN2P17655 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPN2P17655 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CAPN2P17655 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CAPN2P17655 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN2P17655 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 AC018445.3-201ENST00000624177 1945 ntBASIC21.72■■□□□ 1.07
CAPN2P17655 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CAPN2P17655 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CAPN2P17655 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CAPN2P17655 AL845331.1-201ENST00000424978 1190 ntBASIC21.72■■□□□ 1.07
CAPN2P17655 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPN2P17655 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
CAPN2P17655 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPN2P17655 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPN2P17655 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CAPN2P17655 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN2P17655 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPN2P17655 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CAPN2P17655 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.71■■□□□ 1.07
CAPN2P17655 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.71■■□□□ 1.07
CAPN2P17655 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.71■■□□□ 1.07
CAPN2P17655 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CAPN2P17655 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.71■■□□□ 1.07
CAPN2P17655 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPN2P17655 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.71■■□□□ 1.07
CAPN2P17655 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.71■■□□□ 1.07
CAPN2P17655 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
CAPN2P17655 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.7■■□□□ 1.06
CAPN2P17655 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.7■■□□□ 1.06
CAPN2P17655 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CAPN2P17655 AL121672.3-201ENST00000608644 468 ntBASIC21.7■■□□□ 1.06
CAPN2P17655 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.7■■□□□ 1.06
CAPN2P17655 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPN2P17655 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
CAPN2P17655 SMG8-203ENST00000578922 2178 ntBASIC21.7■■□□□ 1.06
CAPN2P17655 AC073314.1-201ENST00000568729 2216 ntBASIC21.7■■□□□ 1.06
CAPN2P17655 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN2P17655 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CAPN2P17655 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms