Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.44■□□□□ 0.06
Hcn1O88704 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Hcn1O88704 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hcn1O88704 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Gm5587-201ENSMUST00000206270 674 ntBASIC15.44■□□□□ 0.06
Hcn1O88704 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hcn1O88704 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hcn1O88704 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hcn1O88704 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.43■□□□□ 0.06
Hcn1O88704 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.43■□□□□ 0.06
Hcn1O88704 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Hcn1O88704 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Hcn1O88704 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Gm37722-201ENSMUST00000193757 208 ntBASIC15.43■□□□□ 0.06
Hcn1O88704 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.43■□□□□ 0.06
Hcn1O88704 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.43■□□□□ 0.06
Hcn1O88704 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hcn1O88704 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.43■□□□□ 0.06
Hcn1O88704 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Hcn1O88704 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hcn1O88704 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hcn1O88704 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Phf7-203ENSMUST00000226565 1971 ntBASIC15.42■□□□□ 0.06
Hcn1O88704 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.42■□□□□ 0.06
Hcn1O88704 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hcn1O88704 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Hcn1O88704 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.41■□□□□ 0.06
Hcn1O88704 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.41■□□□□ 0.06
Hcn1O88704 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hcn1O88704 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.41■□□□□ 0.06
Hcn1O88704 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hcn1O88704 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.41■□□□□ 0.06
Hcn1O88704 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.41■□□□□ 0.06
Hcn1O88704 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hcn1O88704 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms