Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM3O75382 AL160286.2-201ENST00000567150 934 ntBASIC17.65■□□□□ 0.42
TRIM3O75382 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM3O75382 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM3O75382 BCL2-203ENST00000589955 5011 ntBASIC17.65■□□□□ 0.42
TRIM3O75382 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM3O75382 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM3O75382 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM3O75382 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM3O75382 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM3O75382 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 AC005332.7-201ENST00000614046 2005 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM3O75382 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 Z85996.1-201ENST00000494644 937 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM3O75382 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM3O75382 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 AP000525.1-201ENST00000608286 694 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TRIM3O75382 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 AC130371.2-201ENST00000619443 611 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 RCC2P6-201ENST00000526625 1557 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM3O75382 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM3O75382 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM3O75382 AC093503.3-201ENST00000624917 2352 ntBASIC17.64■□□□□ 0.41
TRIM3O75382 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.63■□□□□ 0.41
TRIM3O75382 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM3O75382 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
TRIM3O75382 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM3O75382 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM3O75382 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM3O75382 DGCR10-201ENST00000609839 495 ntBASIC17.63■□□□□ 0.41
TRIM3O75382 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM3O75382 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM3O75382 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM3O75382 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM3O75382 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM3O75382 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM3O75382 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM3O75382 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM3O75382 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 MMP23A-201ENST00000234610 1017 ntBASIC17.62■□□□□ 0.41
TRIM3O75382 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 AC087499.1-201ENST00000418141 1075 ntBASIC17.62■□□□□ 0.41
TRIM3O75382 AC004951.3-201ENST00000418645 1148 ntBASIC17.62■□□□□ 0.41
TRIM3O75382 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM3O75382 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms