Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.396-201ENST00000383949 103 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNU2-20P-201ENST00000410425 191 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP504-201ENST00000410676 117 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP21-201ENST00000410917 96 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 TOMM22P2-201ENST00000430735 237 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.668-201ENST00000516233 93 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RN7SKP282-201ENST00000516824 299 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNU7-110P-201ENST00000516891 62 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-570P-201ENST00000517051 105 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AC015712.3-201ENST00000559380 164 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 MIR4753-201ENST00000585119 83 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 AC025754.2-201ENST00000606491 432 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 MIR3674-201ENST00000636576 68 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNU4-90P-201ENST00000362773 141 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 SNORD81.1-201ENST00000363064 77 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNU1-23P-201ENST00000363361 144 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 SNORD87-201ENST00000364849 89 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-1175P-201ENST00000365200 107 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-472P-201ENST00000384299 107 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 SNORA67.2-201ENST00000384300 149 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP475-201ENST00000410568 110 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 UBBP3-201ENST00000445497 241 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 SEPT14P8-201ENST00000508026 178 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 RN7SKP40-201ENST00000517211 242 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 U4atac.1-201ENST00000618345 95 ntBASIC3.17□□□□□ -1.9
PTCH2Q9Y6C5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 SNORD31B-201ENST00000364977 69 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-438P-201ENST00000365561 103 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 RPL23AP36-201ENST00000413895 458 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 Z98742.3-201ENST00000418637 326 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 HMGN2P9-201ENST00000476875 229 ntBASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PTCH2Q9Y6C5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTCH2Q9Y6C5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.84-201ENST00000363011 104 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 SNORA51.4-201ENST00000364993 124 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.602-201ENST00000410535 92 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 RN7SKP192-201ENST00000411291 327 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 AC104389.3-201ENST00000445629 235 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 AC098869.1-201ENST00000481627 292 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 RNU6-991P-201ENST00000516168 107 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 IGKV3-31-201ENST00000523109 329 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 AL109918.3-201ENST00000603072 338 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 AC062037.2-201ENST00000610137 73 ntBASIC3.15□□□□□ -1.91
PTCH2Q9Y6C5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RNU6-290P-201ENST00000365212 101 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.483-201ENST00000384380 101 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.518-201ENST00000384552 113 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 MT-TW-201ENST00000387382 68 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 MIR1289-2-201ENST00000408360 111 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 AL591806.2-201ENST00000433122 173 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 AC005042.3-201ENST00000453230 174 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 AC108210.2-201ENST00000503681 201 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RNU6-496P-201ENST00000516145 99 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 RNA5SP490-201ENST00000517141 136 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 DEFB122-202ENST00000569013 197 ntBASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
PTCH2Q9Y6C5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 snoU2_19.2-201ENST00000363024 80 ntBASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.238-201ENST00000364441 102 ntBASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 Y_RNA.331-201ENST00000365267 102 ntBASIC3.13□□□□□ -1.91
PTCH2Q9Y6C5 RNU6-505P-201ENST00000384427 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms