Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.92□□□□□ -1.78
HCN4Q9Y3Q4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HCN4Q9Y3Q4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 MIR29B2-201ENST00000385055 81 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 AC010154.1-201ENST00000425857 269 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 AC025750.2-201ENST00000442609 450 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 SNRPGP8-201ENST00000454064 226 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 SNORA31.1-201ENST00000515993 133 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 SNORA31.5-201ENST00000516190 133 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 RNU7-116P-201ENST00000516940 62 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 AC008739.2-201ENST00000597006 317 ntBASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.91□□□□□ -1.78
HCN4Q9Y3Q4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
HCN4Q9Y3Q4 MIR423-201ENST00000362201 94 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 SNORA27.1-201ENST00000362604 124 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 SNORD35B-201ENST00000363660 87 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNU6-271P-201ENST00000363858 105 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNA5SP496-201ENST00000391240 109 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RBMY2UP-201ENST00000453474 324 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNU7-57P-201ENST00000459540 60 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 S100A11P2-201ENST00000467589 312 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 AC010598.1-201ENST00000510378 103 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 RNA5SP164-201ENST00000516533 110 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 AC127455.1-201ENST00000565496 145 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 MIR4769-201ENST00000584126 77 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 POLR3GP1-201ENST00000594073 261 ntBASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HCN4Q9Y3Q4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 RNY1P11-201ENST00000363759 113 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 RNA5SP252-201ENST00000391131 119 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 MIR1283-1-201ENST00000408494 87 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AL159169.1-201ENST00000421119 127 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 SCARNA14-201ENST00000516903 136 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AC090049.2-201ENST00000550377 109 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 MIR378D2-201ENST00000580636 98 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 MIR4435-1-201ENST00000582552 80 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AC005972.2-201ENST00000604690 348 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AL670379.2-201ENST00000604983 252 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AC093732.2-201ENST00000607950 274 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 MIR7851-201ENST00000610611 160 ntBASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
HCN4Q9Y3Q4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 RNU6-674P-201ENST00000363831 107 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 SNORD45.3-201ENST00000363836 72 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 SNORD116-13-201ENST00000384408 92 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 CYCSP4-201ENST00000429682 331 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 RPS26P55-201ENST00000471178 356 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 RAC1P5-201ENST00000512182 576 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 Y_RNA.712-201ENST00000517011 92 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 RPL30P11-203ENST00000598995 310 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 AP001486.2-201ENST00000561652 5113 ntBASIC3.88□□□□□ -1.79
HCN4Q9Y3Q4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNA5SP374-201ENST00000362939 125 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNU6-1064P-201ENST00000410626 104 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNU2-55P-201ENST00000411146 174 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RN7SKP101-201ENST00000411376 320 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 SNORD65B-201ENST00000459126 73 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNU6-221P-201ENST00000459541 99 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 MIR7112-201ENST00000616126 65 ntBASIC3.87□□□□□ -1.79
HCN4Q9Y3Q4 snoZ196.1-201ENST00000625269 89 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms