Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 RNU1-23P-201ENST00000363361 144 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 SNORA38-201ENST00000363946 132 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.376-201ENST00000365638 108 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 RNU6-130P-201ENST00000411112 103 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC004866.1-201ENST00000411748 78 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 SDAD1P3-201ENST00000427380 333 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC009237.7-201ENST00000447357 229 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 LINC01399-202ENST00000458450 244 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC091179.3-201ENST00000474761 144 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 SRIP1-201ENST00000489235 288 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC067942.3-201ENST00000512025 362 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.668-201ENST00000516233 93 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 SNORA48.11-201ENST00000517015 89 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AP003733.2-201ENST00000529409 171 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 MIR4659A-201ENST00000580269 81 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AC011476.5-201ENST00000615594 130 ntBASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DTX4Q9Y2E6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.307-201ENST00000365022 117 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNU6-1318P-201ENST00000365389 103 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNU6-472P-201ENST00000384299 107 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 MT-TW-201ENST00000387382 68 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNU7-14P-201ENST00000459331 62 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNU6-408P-201ENST00000515910 100 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNA5SP282-201ENST00000516355 108 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 RNU6-570P-201ENST00000517051 105 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 AC022616.8-201ENST00000533569 253 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 AC240442.1-201ENST00000616055 283 ntBASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
DTX4Q9Y2E6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 RNU6-234P-201ENST00000365229 104 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AC007395.1-201ENST00000451333 677 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AC098869.1-201ENST00000481627 292 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 RNU6-344P-201ENST00000516635 111 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 CYCSP23-201ENST00000519781 313 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 MIR3668-201ENST00000582138 75 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 AC010615.1-201ENST00000594254 1764 ntBASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.03
DTX4Q9Y2E6 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RNU6-743P-201ENST00000364151 106 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 DEFA7P-201ENST00000382676 285 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RNU6-121P-201ENST00000410525 99 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RPL21P38-201ENST00000418090 167 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 IFNA11P-201ENST00000446352 526 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 UQCRBP2-201ENST00000447827 297 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 SNORD127-201ENST00000458892 86 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RNU7-26P-201ENST00000458980 63 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 AC107222.1-201ENST00000510899 637 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 AC096725.1-201ENST00000514266 313 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RNU1-117P-201ENST00000517041 158 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 RRN3P3-201ENST00000549207 578 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 MIR4298-201ENST00000584380 73 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 SNORD11B-201ENST00000607707 90 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 AL357075.2-201ENST00000614906 189 ntBASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DTX4Q9Y2E6 Z82195.2-201ENST00000612348 18351 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 RNU6-379P-201ENST00000363813 104 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 Y_RNA.489-201ENST00000384410 101 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 RNU6-1026P-201ENST00000384465 108 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
DTX4Q9Y2E6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms