Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 MIR29B2-201ENST00000385055 81 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 SNORA46.1-201ENST00000391069 153 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 MTND5P35-201ENST00000557537 1720 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 MT-TW-201ENST00000387382 68 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 RN7SKP192-201ENST00000411291 327 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AL135786.1-201ENST00000415892 214 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 CR769767.1-201ENST00000436337 346 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AC074133.1-201ENST00000515696 183 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 SNORA40.9-201ENST00000515895 93 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AC136932.1-201ENST00000574771 208 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 RPL17P51-201ENST00000605218 238 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AC005562.2-201ENST00000618264 111 ntBASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSX2IPQ9Y2D8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.483-201ENST00000384380 101 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 MIR549A-201ENST00000385268 96 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 U6atac.2-201ENST00000408644 118 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RNU5A-5P-201ENST00000411054 116 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 CBX3P6-201ENST00000430257 527 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 TRBVB-201ENST00000477100 408 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 AC098869.1-201ENST00000481627 292 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-237P-201ENST00000515985 71 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RNA5SP82-201ENST00000516707 92 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-570P-201ENST00000517051 105 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 HSPE1P18-201ENST00000517602 280 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 AC233702.2-202ENST00000562547 291 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.73□□□□□ -1.97
SSX2IPQ9Y2D8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-461P-201ENST00000364195 107 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-937P-201ENST00000384325 106 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.476-201ENST00000384347 108 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 RPL21P38-201ENST00000418090 167 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC027124.2-201ENST00000428249 105 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC005002.2-201ENST00000438228 269 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 SNORD127-201ENST00000458892 86 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-1132P-201ENST00000459214 107 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 RPL26P26-201ENST00000480251 434 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC140059.1-201ENST00000489238 361 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 SCARNA3-201ENST00000517097 143 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AK6P2-201ENST00000549020 471 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 MZT1P2-201ENST00000604387 248 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC090517.3-201ENST00000625170 141 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AC010615.1-201ENST00000594254 1764 ntBASIC2.72□□□□□ -1.97
SSX2IPQ9Y2D8 AP006437.1-201ENST00000641440 3685 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.84-201ENST00000363011 104 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-626P-201ENST00000363354 107 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.518-201ENST00000384552 113 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC007064.1-201ENST00000412238 351 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AL390729.2-201ENST00000416137 156 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC004386.2-201ENST00000441858 148 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 UQCRBP2-201ENST00000447827 297 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC091179.3-201ENST00000474761 144 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-344P-201ENST00000516635 111 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 AC023157.2-201ENST00000540596 141 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 ZNF658B-202ENST00000615961 3375 ntBASIC2.71□□□□□ -1.98
SSX2IPQ9Y2D8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 snoU2_19.2-201ENST00000363024 80 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 SNORD81.1-201ENST00000363064 77 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 U8.2-201ENST00000363156 134 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 SNORD113-8-201ENST00000363497 74 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.230-201ENST00000364348 109 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 SNORA18.2-201ENST00000383865 132 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms